Gene : Araha.5686s0004 A. halleri v1.1

Defline:  (1 of 7) PF00331 - Glycosyl hydrolase family 10 (Glyco_hydro_10) Genomic Order:  4
Name:  ? Araha.5686s0004 Secondary Identifier:  ? PAC:28863140

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5686s0004 0.5kb upstream 0.5kb upstream 3491 true Scaffold5686: 15854-19344 Arabidopsis halleri
Araha.5686s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5686: 15854-16353 Arabidopsis halleri
Araha.5686s0004 0.5kb downstream 0.5kb downstream 3491 true Scaffold5686: 16354-19844 Arabidopsis halleri
Araha.5686s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5686: 19345-19844 Arabidopsis halleri
Araha.5686s0004 1.0kb upstream 1.0kb upstream 3991 true Scaffold5686: 15354-19344 Arabidopsis halleri
Araha.5686s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5686: 15354-16353 Arabidopsis halleri
Araha.5686s0004 1.0kb downstream 1.0kb downstream 3991 true Scaffold5686: 16354-20344 Arabidopsis halleri
Araha.5686s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5686: 19345-20344 Arabidopsis halleri
Araha.5686s0004 2.0kb upstream 2.0kb upstream 4991 true Scaffold5686: 14354-19344 Arabidopsis halleri
Araha.5686s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5686: 14354-16353 Arabidopsis halleri
Araha.5686s0004 2.0kb downstream 2.0kb downstream 4991 true Scaffold5686: 16354-21344 Arabidopsis halleri
Araha.5686s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5686: 19345-21344 Arabidopsis halleri
Araha.5686s0004 5.0kb upstream 5.0kb upstream 7991 true Scaffold5686: 11354-19344 Arabidopsis halleri
Araha.5686s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5686: 11354-16353 Arabidopsis halleri
Araha.5686s0004 5.0kb downstream 5.0kb downstream 7991 true Scaffold5686: 16354-24344 Arabidopsis halleri
Araha.5686s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5686: 19345-24344 Arabidopsis halleri
Araha.5686s0004 10.0kb upstream 10.0kb upstream 12991 true Scaffold5686: 6354-19344 Arabidopsis halleri
Araha.5686s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5686: 6354-16353 Arabidopsis halleri
Araha.5686s0004 10.0kb downstream 10.0kb downstream 10296 true Scaffold5686: 16354-26649 Arabidopsis halleri
Araha.5686s0004 10.0kb downstream 10.0kb downstream 7305 false Scaffold5686: 19345-26649 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367968 5261 Brassicaceae View MSA
123839176 5264 Brassicales-Malvales View MSA
124341721 5266 SBM View MSA
124242747 5268 Malvidae View MSA
124067450 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain