Gene : Araha.5731s0002 A. halleri v1.1

Defline:  (1 of 3) PTHR31750:SF4 - PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? Araha.5731s0002 Secondary Identifier:  ? PAC:28843981

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5731s0002 0.5kb upstream 0.5kb upstream 1974 true Scaffold5731: 5879-7852 Arabidopsis halleri
Araha.5731s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5731: 7353-7852 Arabidopsis halleri
Araha.5731s0002 0.5kb downstream 0.5kb downstream 1974 true Scaffold5731: 5379-7352 Arabidopsis halleri
Araha.5731s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5731: 5379-5878 Arabidopsis halleri
Araha.5731s0002 1.0kb upstream 1.0kb upstream 2474 true Scaffold5731: 5879-8352 Arabidopsis halleri
Araha.5731s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5731: 7353-8352 Arabidopsis halleri
Araha.5731s0002 1.0kb downstream 1.0kb downstream 2474 true Scaffold5731: 4879-7352 Arabidopsis halleri
Araha.5731s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5731: 4879-5878 Arabidopsis halleri
Araha.5731s0002 2.0kb upstream 2.0kb upstream 3474 true Scaffold5731: 5879-9352 Arabidopsis halleri
Araha.5731s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5731: 7353-9352 Arabidopsis halleri
Araha.5731s0002 2.0kb downstream 2.0kb downstream 3474 true Scaffold5731: 3879-7352 Arabidopsis halleri
Araha.5731s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5731: 3879-5878 Arabidopsis halleri
Araha.5731s0002 5.0kb upstream 5.0kb upstream 6474 true Scaffold5731: 5879-12352 Arabidopsis halleri
Araha.5731s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5731: 7353-12352 Arabidopsis halleri
Araha.5731s0002 5.0kb downstream 5.0kb downstream 6474 true Scaffold5731: 879-7352 Arabidopsis halleri
Araha.5731s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5731: 879-5878 Arabidopsis halleri
Araha.5731s0002 10.0kb upstream 10.0kb upstream 11241 true Scaffold5731: 5879-17119 Arabidopsis halleri
Araha.5731s0002 10.0kb upstream 10.0kb upstream 9767 false Scaffold5731: 7353-17119 Arabidopsis halleri
Araha.5731s0002 10.0kb downstream 10.0kb downstream 7352 true Scaffold5731: 1-7352 Arabidopsis halleri
Araha.5731s0002 10.0kb downstream 10.0kb downstream 5878 false Scaffold5731: 1-5878 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377358 5261 Brassicaceae View MSA
123801509 5264 Brassicales-Malvales View MSA
124298804 5266 SBM View MSA
124150366 5268 Malvidae View MSA
124072601 5270 Rosid View MSA
123750963 5271 Pentapetalae View MSA
122786903 5272 Eudicot View MSA
122048162 5273 Angiosperm View MSA
121344176 5274 Embryophyte View MSA
123428548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain