Gene : Araha.5731s0003 A. halleri v1.1

Defline:  (1 of 3) PTHR31750:SF4 - PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED Genomic Order:  3
Name:  ? Araha.5731s0003 Secondary Identifier:  ? PAC:28843983

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5731s0003 0.5kb upstream 0.5kb upstream 2225 true Scaffold5731: 7493-9717 Arabidopsis halleri
Araha.5731s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5731: 9218-9717 Arabidopsis halleri
Araha.5731s0003 0.5kb downstream 0.5kb downstream 2225 true Scaffold5731: 6993-9217 Arabidopsis halleri
Araha.5731s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5731: 6993-7492 Arabidopsis halleri
Araha.5731s0003 1.0kb upstream 1.0kb upstream 2725 true Scaffold5731: 7493-10217 Arabidopsis halleri
Araha.5731s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5731: 9218-10217 Arabidopsis halleri
Araha.5731s0003 1.0kb downstream 1.0kb downstream 2725 true Scaffold5731: 6493-9217 Arabidopsis halleri
Araha.5731s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5731: 6493-7492 Arabidopsis halleri
Araha.5731s0003 2.0kb upstream 2.0kb upstream 3725 true Scaffold5731: 7493-11217 Arabidopsis halleri
Araha.5731s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5731: 9218-11217 Arabidopsis halleri
Araha.5731s0003 2.0kb downstream 2.0kb downstream 3725 true Scaffold5731: 5493-9217 Arabidopsis halleri
Araha.5731s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5731: 5493-7492 Arabidopsis halleri
Araha.5731s0003 5.0kb upstream 5.0kb upstream 6725 true Scaffold5731: 7493-14217 Arabidopsis halleri
Araha.5731s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5731: 9218-14217 Arabidopsis halleri
Araha.5731s0003 5.0kb downstream 5.0kb downstream 6725 true Scaffold5731: 2493-9217 Arabidopsis halleri
Araha.5731s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5731: 2493-7492 Arabidopsis halleri
Araha.5731s0003 10.0kb upstream 10.0kb upstream 9627 true Scaffold5731: 7493-17119 Arabidopsis halleri
Araha.5731s0003 10.0kb upstream 10.0kb upstream 7902 false Scaffold5731: 9218-17119 Arabidopsis halleri
Araha.5731s0003 10.0kb downstream 10.0kb downstream 9217 true Scaffold5731: 1-9217 Arabidopsis halleri
Araha.5731s0003 10.0kb downstream 10.0kb downstream 7492 false Scaffold5731: 1-7492 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360736 5261 Brassicaceae View MSA
123838568 5264 Brassicales-Malvales View MSA
124341022 5266 SBM View MSA
124253223 5268 Malvidae View MSA
124072601 5270 Rosid View MSA
123750963 5271 Pentapetalae View MSA
122786903 5272 Eudicot View MSA
122048162 5273 Angiosperm View MSA
121344176 5274 Embryophyte View MSA
123428548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain