Gene : Araha.5645s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  2
Name:  ? Araha.5645s0002 Secondary Identifier:  ? PAC:28837859
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0 Pathways

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5645s0002 0.5kb upstream 0.5kb upstream 3600 true Scaffold5645: 5971-9570 Arabidopsis halleri
Araha.5645s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5645: 9071-9570 Arabidopsis halleri
Araha.5645s0002 0.5kb downstream 0.5kb downstream 3600 true Scaffold5645: 5471-9070 Arabidopsis halleri
Araha.5645s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5645: 5471-5970 Arabidopsis halleri
Araha.5645s0002 1.0kb upstream 1.0kb upstream 4100 true Scaffold5645: 5971-10070 Arabidopsis halleri
Araha.5645s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5645: 9071-10070 Arabidopsis halleri
Araha.5645s0002 1.0kb downstream 1.0kb downstream 4100 true Scaffold5645: 4971-9070 Arabidopsis halleri
Araha.5645s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5645: 4971-5970 Arabidopsis halleri
Araha.5645s0002 2.0kb upstream 2.0kb upstream 5100 true Scaffold5645: 5971-11070 Arabidopsis halleri
Araha.5645s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5645: 9071-11070 Arabidopsis halleri
Araha.5645s0002 2.0kb downstream 2.0kb downstream 5100 true Scaffold5645: 3971-9070 Arabidopsis halleri
Araha.5645s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5645: 3971-5970 Arabidopsis halleri
Araha.5645s0002 5.0kb upstream 5.0kb upstream 8100 true Scaffold5645: 5971-14070 Arabidopsis halleri
Araha.5645s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5645: 9071-14070 Arabidopsis halleri
Araha.5645s0002 5.0kb downstream 5.0kb downstream 8100 true Scaffold5645: 971-9070 Arabidopsis halleri
Araha.5645s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5645: 971-5970 Arabidopsis halleri
Araha.5645s0002 10.0kb upstream 10.0kb upstream 13100 true Scaffold5645: 5971-19070 Arabidopsis halleri
Araha.5645s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5645: 9071-19070 Arabidopsis halleri
Araha.5645s0002 10.0kb downstream 10.0kb downstream 9070 true Scaffold5645: 1-9070 Arabidopsis halleri
Araha.5645s0002 10.0kb downstream 10.0kb downstream 5970 false Scaffold5645: 1-5970 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366056 5261 Brassicaceae View MSA
123840797 5264 Brassicales-Malvales View MSA
124337965 5266 SBM View MSA
124245103 5268 Malvidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain