Gene : Araha.10972s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR11476:SF5 - CLASS II AARS AND BIOTIN SYNTHETASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Araha.10972s0001 Secondary Identifier:  ? PAC:28853319
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10972s0001 0.5kb upstream 0.5kb upstream 3458 true Scaffold10972: 1321-4778 Arabidopsis halleri
Araha.10972s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold10972: 4279-4778 Arabidopsis halleri
Araha.10972s0001 0.5kb downstream 0.5kb downstream 3458 true Scaffold10972: 821-4278 Arabidopsis halleri
Araha.10972s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold10972: 821-1320 Arabidopsis halleri
Araha.10972s0001 1.0kb upstream 1.0kb upstream 3958 true Scaffold10972: 1321-5278 Arabidopsis halleri
Araha.10972s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold10972: 4279-5278 Arabidopsis halleri
Araha.10972s0001 1.0kb downstream 1.0kb downstream 3958 true Scaffold10972: 321-4278 Arabidopsis halleri
Araha.10972s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold10972: 321-1320 Arabidopsis halleri
Araha.10972s0001 2.0kb upstream 2.0kb upstream 4958 true Scaffold10972: 1321-6278 Arabidopsis halleri
Araha.10972s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold10972: 4279-6278 Arabidopsis halleri
Araha.10972s0001 2.0kb downstream 2.0kb downstream 4278 true Scaffold10972: 1-4278 Arabidopsis halleri
Araha.10972s0001 2.0kb downstream 2.0kb downstream 1320 false Scaffold10972: 1-1320 Arabidopsis halleri
Araha.10972s0001 5.0kb upstream 5.0kb upstream 7958 true Scaffold10972: 1321-9278 Arabidopsis halleri
Araha.10972s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold10972: 4279-9278 Arabidopsis halleri
Araha.10972s0001 5.0kb downstream 5.0kb downstream 4278 true Scaffold10972: 1-4278 Arabidopsis halleri
Araha.10972s0001 5.0kb downstream 5.0kb downstream 1320 false Scaffold10972: 1-1320 Arabidopsis halleri
Araha.10972s0001 10.0kb upstream 10.0kb upstream 12958 true Scaffold10972: 1321-14278 Arabidopsis halleri
Araha.10972s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold10972: 4279-14278 Arabidopsis halleri
Araha.10972s0001 10.0kb downstream 10.0kb downstream 4278 true Scaffold10972: 1-4278 Arabidopsis halleri
Araha.10972s0001 10.0kb downstream 10.0kb downstream 1320 false Scaffold10972: 1-1320 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371522 5261 Brassicaceae View MSA
123828027 5264 Brassicales-Malvales View MSA
124321502 5266 SBM View MSA
124242032 5268 Malvidae View MSA
124069172 5270 Rosid View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain