Gene : Araha.10896s0004 A. halleri v1.1

Defline:  (1 of 4) 2.4.1.14 - Sucrose-phosphate synthase / UDP-glucose-fructose-phosphate glucosyltransferase Genomic Order:  4
Name:  ? Araha.10896s0004 Secondary Identifier:  ? PAC:28859617

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7238 Arabidopsis halleri pathologic  
Ahalleri SUCSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10896s0004 0.5kb upstream 0.5kb upstream 4979 true Scaffold10896: 7755-12733 Arabidopsis halleri
Araha.10896s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold10896: 12234-12733 Arabidopsis halleri
Araha.10896s0004 0.5kb downstream 0.5kb downstream 4979 true Scaffold10896: 7255-12233 Arabidopsis halleri
Araha.10896s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold10896: 7255-7754 Arabidopsis halleri
Araha.10896s0004 1.0kb upstream 1.0kb upstream 5479 true Scaffold10896: 7755-13233 Arabidopsis halleri
Araha.10896s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold10896: 12234-13233 Arabidopsis halleri
Araha.10896s0004 1.0kb downstream 1.0kb downstream 5479 true Scaffold10896: 6755-12233 Arabidopsis halleri
Araha.10896s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold10896: 6755-7754 Arabidopsis halleri
Araha.10896s0004 2.0kb upstream 2.0kb upstream 6479 true Scaffold10896: 7755-14233 Arabidopsis halleri
Araha.10896s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold10896: 12234-14233 Arabidopsis halleri
Araha.10896s0004 2.0kb downstream 2.0kb downstream 6479 true Scaffold10896: 5755-12233 Arabidopsis halleri
Araha.10896s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold10896: 5755-7754 Arabidopsis halleri
Araha.10896s0004 5.0kb upstream 5.0kb upstream 9479 true Scaffold10896: 7755-17233 Arabidopsis halleri
Araha.10896s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold10896: 12234-17233 Arabidopsis halleri
Araha.10896s0004 5.0kb downstream 5.0kb downstream 9479 true Scaffold10896: 2755-12233 Arabidopsis halleri
Araha.10896s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold10896: 2755-7754 Arabidopsis halleri
Araha.10896s0004 10.0kb upstream 10.0kb upstream 14479 true Scaffold10896: 7755-22233 Arabidopsis halleri
Araha.10896s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold10896: 12234-22233 Arabidopsis halleri
Araha.10896s0004 10.0kb downstream 10.0kb downstream 12233 true Scaffold10896: 1-12233 Arabidopsis halleri
Araha.10896s0004 10.0kb downstream 10.0kb downstream 7754 false Scaffold10896: 1-7754 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362474 5261 Brassicaceae View MSA
123839542 5264 Brassicales-Malvales View MSA
124341610 5266 SBM View MSA
124240542 5268 Malvidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain