Gene : Araha.5675s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR10743:SF2 - PROTEIN RER1B-RELATED Genomic Order:  1
Name:  ? Araha.5675s0001 Secondary Identifier:  ? PAC:28856850

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5675s0001 0.5kb upstream 0.5kb upstream 1904 true Scaffold5675: 923-2826 Arabidopsis halleri
Araha.5675s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5675: 2327-2826 Arabidopsis halleri
Araha.5675s0001 0.5kb downstream 0.5kb downstream 1904 true Scaffold5675: 423-2326 Arabidopsis halleri
Araha.5675s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5675: 423-922 Arabidopsis halleri
Araha.5675s0001 1.0kb upstream 1.0kb upstream 2404 true Scaffold5675: 923-3326 Arabidopsis halleri
Araha.5675s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5675: 2327-3326 Arabidopsis halleri
Araha.5675s0001 1.0kb downstream 1.0kb downstream 2326 true Scaffold5675: 1-2326 Arabidopsis halleri
Araha.5675s0001 1.0kb downstream 1.0kb downstream 922 false Scaffold5675: 1-922 Arabidopsis halleri
Araha.5675s0001 2.0kb upstream 2.0kb upstream 3404 true Scaffold5675: 923-4326 Arabidopsis halleri
Araha.5675s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5675: 2327-4326 Arabidopsis halleri
Araha.5675s0001 2.0kb downstream 2.0kb downstream 2326 true Scaffold5675: 1-2326 Arabidopsis halleri
Araha.5675s0001 2.0kb downstream 2.0kb downstream 922 false Scaffold5675: 1-922 Arabidopsis halleri
Araha.5675s0001 5.0kb upstream 5.0kb upstream 6404 true Scaffold5675: 923-7326 Arabidopsis halleri
Araha.5675s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5675: 2327-7326 Arabidopsis halleri
Araha.5675s0001 5.0kb downstream 5.0kb downstream 2326 true Scaffold5675: 1-2326 Arabidopsis halleri
Araha.5675s0001 5.0kb downstream 5.0kb downstream 922 false Scaffold5675: 1-922 Arabidopsis halleri
Araha.5675s0001 10.0kb upstream 10.0kb upstream 11404 true Scaffold5675: 923-12326 Arabidopsis halleri
Araha.5675s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold5675: 2327-12326 Arabidopsis halleri
Araha.5675s0001 10.0kb downstream 10.0kb downstream 2326 true Scaffold5675: 1-2326 Arabidopsis halleri
Araha.5675s0001 10.0kb downstream 10.0kb downstream 922 false Scaffold5675: 1-922 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364397 5261 Brassicaceae View MSA
123840206 5264 Brassicales-Malvales View MSA
124349349 5266 SBM View MSA
124253453 5268 Malvidae View MSA
124071881 5270 Rosid View MSA
123745031 5271 Pentapetalae View MSA
122794273 5272 Eudicot View MSA
122048346 5273 Angiosperm View MSA
121345453 5274 Embryophyte View MSA
123424083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain