Gene : Araha.5618s0001 A. halleri v1.1

Defline:  (1 of 12) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  1
Name:  ? Araha.5618s0001 Secondary Identifier:  ? PAC:28847211

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5618s0001 0.5kb upstream 0.5kb upstream 1307 true Scaffold5618: 1-1307 Arabidopsis halleri
Araha.5618s0001 0.5kb upstream 0.5kb upstream 4 false Scaffold5618: 1-4 Arabidopsis halleri
Araha.5618s0001 0.5kb downstream 0.5kb downstream 1803 true Scaffold5618: 5-1807 Arabidopsis halleri
Araha.5618s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5618: 1308-1807 Arabidopsis halleri
Araha.5618s0001 1.0kb upstream 1.0kb upstream 1307 true Scaffold5618: 1-1307 Arabidopsis halleri
Araha.5618s0001 1.0kb upstream 1.0kb upstream 4 false Scaffold5618: 1-4 Arabidopsis halleri
Araha.5618s0001 1.0kb downstream 1.0kb downstream 2303 true Scaffold5618: 5-2307 Arabidopsis halleri
Araha.5618s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5618: 1308-2307 Arabidopsis halleri
Araha.5618s0001 2.0kb upstream 2.0kb upstream 1307 true Scaffold5618: 1-1307 Arabidopsis halleri
Araha.5618s0001 2.0kb upstream 2.0kb upstream 4 false Scaffold5618: 1-4 Arabidopsis halleri
Araha.5618s0001 2.0kb downstream 2.0kb downstream 3303 true Scaffold5618: 5-3307 Arabidopsis halleri
Araha.5618s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5618: 1308-3307 Arabidopsis halleri
Araha.5618s0001 5.0kb upstream 5.0kb upstream 1307 true Scaffold5618: 1-1307 Arabidopsis halleri
Araha.5618s0001 5.0kb upstream 5.0kb upstream 4 false Scaffold5618: 1-4 Arabidopsis halleri
Araha.5618s0001 5.0kb downstream 5.0kb downstream 6303 true Scaffold5618: 5-6307 Arabidopsis halleri
Araha.5618s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5618: 1308-6307 Arabidopsis halleri
Araha.5618s0001 10.0kb upstream 10.0kb upstream 1307 true Scaffold5618: 1-1307 Arabidopsis halleri
Araha.5618s0001 10.0kb upstream 10.0kb upstream 4 false Scaffold5618: 1-4 Arabidopsis halleri
Araha.5618s0001 10.0kb downstream 10.0kb downstream 11303 true Scaffold5618: 5-11307 Arabidopsis halleri
Araha.5618s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5618: 1308-11307 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041222 5273 Angiosperm View MSA
122377068 5261 Brassicaceae View MSA
123837287 5264 Brassicales-Malvales View MSA
124345997 5266 SBM View MSA
124238354 5268 Malvidae View MSA
124061331 5270 Rosid View MSA
123737344 5271 Pentapetalae View MSA
122792572 5272 Eudicot View MSA
121350312 5274 Embryophyte View MSA
123381673 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain