Gene : Araha.5618s0003 A. halleri v1.1

Defline:  (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  3
Name:  ? Araha.5618s0003 Secondary Identifier:  ? PAC:28847195

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5618s0003 0.5kb upstream 0.5kb upstream 2824 true Scaffold5618: 6655-9478 Arabidopsis halleri
Araha.5618s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5618: 8979-9478 Arabidopsis halleri
Araha.5618s0003 0.5kb downstream 0.5kb downstream 2824 true Scaffold5618: 6155-8978 Arabidopsis halleri
Araha.5618s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5618: 6155-6654 Arabidopsis halleri
Araha.5618s0003 1.0kb upstream 1.0kb upstream 3324 true Scaffold5618: 6655-9978 Arabidopsis halleri
Araha.5618s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5618: 8979-9978 Arabidopsis halleri
Araha.5618s0003 1.0kb downstream 1.0kb downstream 3324 true Scaffold5618: 5655-8978 Arabidopsis halleri
Araha.5618s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5618: 5655-6654 Arabidopsis halleri
Araha.5618s0003 2.0kb upstream 2.0kb upstream 4324 true Scaffold5618: 6655-10978 Arabidopsis halleri
Araha.5618s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5618: 8979-10978 Arabidopsis halleri
Araha.5618s0003 2.0kb downstream 2.0kb downstream 4324 true Scaffold5618: 4655-8978 Arabidopsis halleri
Araha.5618s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5618: 4655-6654 Arabidopsis halleri
Araha.5618s0003 5.0kb upstream 5.0kb upstream 7324 true Scaffold5618: 6655-13978 Arabidopsis halleri
Araha.5618s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5618: 8979-13978 Arabidopsis halleri
Araha.5618s0003 5.0kb downstream 5.0kb downstream 7324 true Scaffold5618: 1655-8978 Arabidopsis halleri
Araha.5618s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5618: 1655-6654 Arabidopsis halleri
Araha.5618s0003 10.0kb upstream 10.0kb upstream 12324 true Scaffold5618: 6655-18978 Arabidopsis halleri
Araha.5618s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5618: 8979-18978 Arabidopsis halleri
Araha.5618s0003 10.0kb downstream 10.0kb downstream 8978 true Scaffold5618: 1-8978 Arabidopsis halleri
Araha.5618s0003 10.0kb downstream 10.0kb downstream 6654 false Scaffold5618: 1-6654 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361426 5261 Brassicaceae View MSA
123833895 5264 Brassicales-Malvales View MSA
124344679 5266 SBM View MSA
124240379 5268 Malvidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain