Gene : Araha.10984s0005 A. halleri v1.1
Defline:  (1 of 1) PTHR13069:SF11 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6 Genomic Order:  5
Name:  ? Araha.10984s0005 Secondary Identifier:  ? PAC:28854596
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6829 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10984s0005 0.5kb upstream 0.5kb upstream 2342 true Scaffold10984: 25432-27773 Arabidopsis halleri
Araha.10984s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold10984: 25432-25931 Arabidopsis halleri
Araha.10984s0005 0.5kb downstream 0.5kb downstream 2342 true Scaffold10984: 25932-28273 Arabidopsis halleri
Araha.10984s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold10984: 27774-28273 Arabidopsis halleri
Araha.10984s0005 1.0kb upstream 1.0kb upstream 2842 true Scaffold10984: 24932-27773 Arabidopsis halleri
Araha.10984s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold10984: 24932-25931 Arabidopsis halleri
Araha.10984s0005 1.0kb downstream 1.0kb downstream 2842 true Scaffold10984: 25932-28773 Arabidopsis halleri
Araha.10984s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold10984: 27774-28773 Arabidopsis halleri
Araha.10984s0005 2.0kb upstream 2.0kb upstream 3842 true Scaffold10984: 23932-27773 Arabidopsis halleri
Araha.10984s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold10984: 23932-25931 Arabidopsis halleri
Araha.10984s0005 2.0kb downstream 2.0kb downstream 3842 true Scaffold10984: 25932-29773 Arabidopsis halleri
Araha.10984s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold10984: 27774-29773 Arabidopsis halleri
Araha.10984s0005 5.0kb upstream 5.0kb upstream 6842 true Scaffold10984: 20932-27773 Arabidopsis halleri
Araha.10984s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold10984: 20932-25931 Arabidopsis halleri
Araha.10984s0005 5.0kb downstream 5.0kb downstream 6842 true Scaffold10984: 25932-32773 Arabidopsis halleri
Araha.10984s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold10984: 27774-32773 Arabidopsis halleri
Araha.10984s0005 10.0kb upstream 10.0kb upstream 11842 true Scaffold10984: 15932-27773 Arabidopsis halleri
Araha.10984s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold10984: 15932-25931 Arabidopsis halleri
Araha.10984s0005 10.0kb downstream 10.0kb downstream 8930 true Scaffold10984: 25932-34861 Arabidopsis halleri
Araha.10984s0005 10.0kb downstream 10.0kb downstream 7088 false Scaffold10984: 27774-34861 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364039 5261 Brassicaceae View MSA
123835550 5264 Brassicales-Malvales View MSA
124341724 5266 SBM View MSA
124239519 5268 Malvidae View MSA
124065403 5270 Rosid View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain