Gene : Araha.11658s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR34190:SF3 - MICROSPORE-SPECIFIC PROMOTER 2 Genomic Order:  3
Name:  ? Araha.11658s0003 Secondary Identifier:  ? PAC:28844088

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11658s0003 0.5kb upstream 0.5kb upstream 1679 true Scaffold11658: 4939-6617 Arabidopsis halleri
Araha.11658s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold11658: 4939-5438 Arabidopsis halleri
Araha.11658s0003 0.5kb downstream 0.5kb downstream 1679 true Scaffold11658: 5439-7117 Arabidopsis halleri
Araha.11658s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold11658: 6618-7117 Arabidopsis halleri
Araha.11658s0003 1.0kb upstream 1.0kb upstream 2179 true Scaffold11658: 4439-6617 Arabidopsis halleri
Araha.11658s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold11658: 4439-5438 Arabidopsis halleri
Araha.11658s0003 1.0kb downstream 1.0kb downstream 2179 true Scaffold11658: 5439-7617 Arabidopsis halleri
Araha.11658s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold11658: 6618-7617 Arabidopsis halleri
Araha.11658s0003 2.0kb upstream 2.0kb upstream 3179 true Scaffold11658: 3439-6617 Arabidopsis halleri
Araha.11658s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold11658: 3439-5438 Arabidopsis halleri
Araha.11658s0003 2.0kb downstream 2.0kb downstream 3179 true Scaffold11658: 5439-8617 Arabidopsis halleri
Araha.11658s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold11658: 6618-8617 Arabidopsis halleri
Araha.11658s0003 5.0kb upstream 5.0kb upstream 6179 true Scaffold11658: 439-6617 Arabidopsis halleri
Araha.11658s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold11658: 439-5438 Arabidopsis halleri
Araha.11658s0003 5.0kb downstream 5.0kb downstream 6179 true Scaffold11658: 5439-11617 Arabidopsis halleri
Araha.11658s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold11658: 6618-11617 Arabidopsis halleri
Araha.11658s0003 10.0kb upstream 10.0kb upstream 6617 true Scaffold11658: 1-6617 Arabidopsis halleri
Araha.11658s0003 10.0kb upstream 10.0kb upstream 5438 false Scaffold11658: 1-5438 Arabidopsis halleri
Araha.11658s0003 10.0kb downstream 10.0kb downstream 11179 true Scaffold11658: 5439-16617 Arabidopsis halleri
Araha.11658s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold11658: 6618-16617 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791974 5273 Angiosperm View MSA
122366672 5261 Brassicaceae View MSA
123829034 5264 Brassicales-Malvales View MSA
124339219 5266 SBM View MSA
124243581 5268 Malvidae View MSA
124068285 5270 Rosid View MSA
123748958 5271 Pentapetalae View MSA
122795694 5272 Eudicot View MSA
121063238 5274 Embryophyte View MSA
123103002 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain