Gene : Araha.11630s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  3
Name:  ? Araha.11630s0003 Secondary Identifier:  ? PAC:28837951

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11630s0003 0.5kb upstream 0.5kb upstream 3495 true Scaffold11630: 5075-8569 Arabidopsis halleri
Araha.11630s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold11630: 5075-5574 Arabidopsis halleri
Araha.11630s0003 0.5kb downstream 0.5kb downstream 3495 true Scaffold11630: 5575-9069 Arabidopsis halleri
Araha.11630s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold11630: 8570-9069 Arabidopsis halleri
Araha.11630s0003 1.0kb upstream 1.0kb upstream 3995 true Scaffold11630: 4575-8569 Arabidopsis halleri
Araha.11630s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold11630: 4575-5574 Arabidopsis halleri
Araha.11630s0003 1.0kb downstream 1.0kb downstream 3995 true Scaffold11630: 5575-9569 Arabidopsis halleri
Araha.11630s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold11630: 8570-9569 Arabidopsis halleri
Araha.11630s0003 2.0kb upstream 2.0kb upstream 4995 true Scaffold11630: 3575-8569 Arabidopsis halleri
Araha.11630s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold11630: 3575-5574 Arabidopsis halleri
Araha.11630s0003 2.0kb downstream 2.0kb downstream 4995 true Scaffold11630: 5575-10569 Arabidopsis halleri
Araha.11630s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold11630: 8570-10569 Arabidopsis halleri
Araha.11630s0003 5.0kb upstream 5.0kb upstream 7995 true Scaffold11630: 575-8569 Arabidopsis halleri
Araha.11630s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold11630: 575-5574 Arabidopsis halleri
Araha.11630s0003 5.0kb downstream 5.0kb downstream 7995 true Scaffold11630: 5575-13569 Arabidopsis halleri
Araha.11630s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold11630: 8570-13569 Arabidopsis halleri
Araha.11630s0003 10.0kb upstream 10.0kb upstream 8569 true Scaffold11630: 1-8569 Arabidopsis halleri
Araha.11630s0003 10.0kb upstream 10.0kb upstream 5574 false Scaffold11630: 1-5574 Arabidopsis halleri
Araha.11630s0003 10.0kb downstream 10.0kb downstream 12995 true Scaffold11630: 5575-18569 Arabidopsis halleri
Araha.11630s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold11630: 8570-18569 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368643 5261 Brassicaceae View MSA
123833334 5264 Brassicales-Malvales View MSA
124321862 5266 SBM View MSA
124243428 5268 Malvidae View MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain