Gene : Araha.11756s0004 A. halleri v1.1

Defline:  (1 of 1) PTHR12383:SF27 - SIGNAL PEPTIDASE I Genomic Order:  4
Name:  ? Araha.11756s0004 Secondary Identifier:  ? PAC:28856666

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0004 0.5kb upstream 0.5kb upstream 1427 true Scaffold11756: 8549-9975 Arabidopsis halleri
Araha.11756s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 9476-9975 Arabidopsis halleri
Araha.11756s0004 0.5kb downstream 0.5kb downstream 1427 true Scaffold11756: 8049-9475 Arabidopsis halleri
Araha.11756s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 8049-8548 Arabidopsis halleri
Araha.11756s0004 1.0kb upstream 1.0kb upstream 1927 true Scaffold11756: 8549-10475 Arabidopsis halleri
Araha.11756s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 9476-10475 Arabidopsis halleri
Araha.11756s0004 1.0kb downstream 1.0kb downstream 1927 true Scaffold11756: 7549-9475 Arabidopsis halleri
Araha.11756s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 7549-8548 Arabidopsis halleri
Araha.11756s0004 2.0kb upstream 2.0kb upstream 2927 true Scaffold11756: 8549-11475 Arabidopsis halleri
Araha.11756s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 9476-11475 Arabidopsis halleri
Araha.11756s0004 2.0kb downstream 2.0kb downstream 2927 true Scaffold11756: 6549-9475 Arabidopsis halleri
Araha.11756s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 6549-8548 Arabidopsis halleri
Araha.11756s0004 5.0kb upstream 5.0kb upstream 5927 true Scaffold11756: 8549-14475 Arabidopsis halleri
Araha.11756s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 9476-14475 Arabidopsis halleri
Araha.11756s0004 5.0kb downstream 5.0kb downstream 5927 true Scaffold11756: 3549-9475 Arabidopsis halleri
Araha.11756s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 3549-8548 Arabidopsis halleri
Araha.11756s0004 10.0kb upstream 10.0kb upstream 10927 true Scaffold11756: 8549-19475 Arabidopsis halleri
Araha.11756s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 9476-19475 Arabidopsis halleri
Araha.11756s0004 10.0kb downstream 10.0kb downstream 9475 true Scaffold11756: 1-9475 Arabidopsis halleri
Araha.11756s0004 10.0kb downstream 10.0kb downstream 8548 false Scaffold11756: 1-8548 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487106 5273 Angiosperm Singleton cluster - no MSA
122320837 5261 Brassicaceae Singleton cluster - no MSA
123762432 5264 Brassicales-Malvales Singleton cluster - no MSA
124261067 5266 SBM Singleton cluster - no MSA
124117686 5268 Malvidae Singleton cluster - no MSA
123847077 5270 Rosid Singleton cluster - no MSA
123433357 5271 Pentapetalae Singleton cluster - no MSA
122468977 5272 Eudicot Singleton cluster - no MSA
123428894 5275 Viridiplantae View MSA
120760495 5274 Embryophyte Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain