Gene : Araha.5903s0004 A. halleri v1.1
Defline:  (1 of 4) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  4
Name:  ? Araha.5903s0004 Secondary Identifier:  ? PAC:28861340
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5903s0004 0.5kb upstream 0.5kb upstream 7975 true Scaffold5903: 15316-23290 Arabidopsis halleri
Araha.5903s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5903: 22791-23290 Arabidopsis halleri
Araha.5903s0004 0.5kb downstream 0.5kb downstream 7975 true Scaffold5903: 14816-22790 Arabidopsis halleri
Araha.5903s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5903: 14816-15315 Arabidopsis halleri
Araha.5903s0004 1.0kb upstream 1.0kb upstream 8475 true Scaffold5903: 15316-23790 Arabidopsis halleri
Araha.5903s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5903: 22791-23790 Arabidopsis halleri
Araha.5903s0004 1.0kb downstream 1.0kb downstream 8475 true Scaffold5903: 14316-22790 Arabidopsis halleri
Araha.5903s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5903: 14316-15315 Arabidopsis halleri
Araha.5903s0004 2.0kb upstream 2.0kb upstream 9475 true Scaffold5903: 15316-24790 Arabidopsis halleri
Araha.5903s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5903: 22791-24790 Arabidopsis halleri
Araha.5903s0004 2.0kb downstream 2.0kb downstream 9475 true Scaffold5903: 13316-22790 Arabidopsis halleri
Araha.5903s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5903: 13316-15315 Arabidopsis halleri
Araha.5903s0004 5.0kb upstream 5.0kb upstream 12475 true Scaffold5903: 15316-27790 Arabidopsis halleri
Araha.5903s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5903: 22791-27790 Arabidopsis halleri
Araha.5903s0004 5.0kb downstream 5.0kb downstream 12475 true Scaffold5903: 10316-22790 Arabidopsis halleri
Araha.5903s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5903: 10316-15315 Arabidopsis halleri
Araha.5903s0004 10.0kb upstream 10.0kb upstream 13554 true Scaffold5903: 15316-28869 Arabidopsis halleri
Araha.5903s0004 10.0kb upstream 10.0kb upstream 6079 false Scaffold5903: 22791-28869 Arabidopsis halleri
Araha.5903s0004 10.0kb downstream 10.0kb downstream 17475 true Scaffold5903: 5316-22790 Arabidopsis halleri
Araha.5903s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5903: 5316-15315 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122375550 5261 Brassicaceae View MSA
123831002 5264 Brassicales-Malvales View MSA
124350072 5266 SBM View MSA
124238585 5268 Malvidae View MSA
124063415 5270 Rosid View MSA
123737064 5271 Pentapetalae View MSA
122787980 5272 Eudicot View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain