Gene : Araha.11372s0004 A. halleri v1.1

Defline:  (1 of 2) PTHR15601 - STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 Genomic Order:  4
Name:  ? Araha.11372s0004 Secondary Identifier:  ? PAC:28857751

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11372s0004 0.5kb upstream 0.5kb upstream 1796 true Scaffold11372: 12474-14269 Arabidopsis halleri
Araha.11372s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold11372: 13770-14269 Arabidopsis halleri
Araha.11372s0004 0.5kb downstream 0.5kb downstream 1796 true Scaffold11372: 11974-13769 Arabidopsis halleri
Araha.11372s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold11372: 11974-12473 Arabidopsis halleri
Araha.11372s0004 1.0kb upstream 1.0kb upstream 2296 true Scaffold11372: 12474-14769 Arabidopsis halleri
Araha.11372s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold11372: 13770-14769 Arabidopsis halleri
Araha.11372s0004 1.0kb downstream 1.0kb downstream 2296 true Scaffold11372: 11474-13769 Arabidopsis halleri
Araha.11372s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold11372: 11474-12473 Arabidopsis halleri
Araha.11372s0004 2.0kb upstream 2.0kb upstream 3296 true Scaffold11372: 12474-15769 Arabidopsis halleri
Araha.11372s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold11372: 13770-15769 Arabidopsis halleri
Araha.11372s0004 2.0kb downstream 2.0kb downstream 3296 true Scaffold11372: 10474-13769 Arabidopsis halleri
Araha.11372s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold11372: 10474-12473 Arabidopsis halleri
Araha.11372s0004 5.0kb upstream 5.0kb upstream 6296 true Scaffold11372: 12474-18769 Arabidopsis halleri
Araha.11372s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold11372: 13770-18769 Arabidopsis halleri
Araha.11372s0004 5.0kb downstream 5.0kb downstream 6296 true Scaffold11372: 7474-13769 Arabidopsis halleri
Araha.11372s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold11372: 7474-12473 Arabidopsis halleri
Araha.11372s0004 10.0kb upstream 10.0kb upstream 11296 true Scaffold11372: 12474-23769 Arabidopsis halleri
Araha.11372s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold11372: 13770-23769 Arabidopsis halleri
Araha.11372s0004 10.0kb downstream 10.0kb downstream 11296 true Scaffold11372: 2474-13769 Arabidopsis halleri
Araha.11372s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold11372: 2474-12473 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381593 5261 Brassicaceae View MSA
123829697 5264 Brassicales-Malvales View MSA
124340832 5266 SBM View MSA
124244099 5268 Malvidae View MSA
124071023 5270 Rosid View MSA
123745695 5271 Pentapetalae View MSA
122795442 5272 Eudicot View MSA
122050162 5273 Angiosperm View MSA
121345372 5274 Embryophyte View MSA
123428764 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain