Gene : Araha.5811s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR10743:SF2 - PROTEIN RER1B-RELATED Genomic Order:  3
Name:  ? Araha.5811s0003 Secondary Identifier:  ? PAC:28860383

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5811s0003 0.5kb upstream 0.5kb upstream 2422 true Scaffold5811: 6179-8600 Arabidopsis halleri
Araha.5811s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5811: 8101-8600 Arabidopsis halleri
Araha.5811s0003 0.5kb downstream 0.5kb downstream 2422 true Scaffold5811: 5679-8100 Arabidopsis halleri
Araha.5811s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5811: 5679-6178 Arabidopsis halleri
Araha.5811s0003 1.0kb upstream 1.0kb upstream 2922 true Scaffold5811: 6179-9100 Arabidopsis halleri
Araha.5811s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5811: 8101-9100 Arabidopsis halleri
Araha.5811s0003 1.0kb downstream 1.0kb downstream 2922 true Scaffold5811: 5179-8100 Arabidopsis halleri
Araha.5811s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5811: 5179-6178 Arabidopsis halleri
Araha.5811s0003 2.0kb upstream 2.0kb upstream 3922 true Scaffold5811: 6179-10100 Arabidopsis halleri
Araha.5811s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5811: 8101-10100 Arabidopsis halleri
Araha.5811s0003 2.0kb downstream 2.0kb downstream 3922 true Scaffold5811: 4179-8100 Arabidopsis halleri
Araha.5811s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5811: 4179-6178 Arabidopsis halleri
Araha.5811s0003 5.0kb upstream 5.0kb upstream 6922 true Scaffold5811: 6179-13100 Arabidopsis halleri
Araha.5811s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5811: 8101-13100 Arabidopsis halleri
Araha.5811s0003 5.0kb downstream 5.0kb downstream 6922 true Scaffold5811: 1179-8100 Arabidopsis halleri
Araha.5811s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5811: 1179-6178 Arabidopsis halleri
Araha.5811s0003 10.0kb upstream 10.0kb upstream 9174 true Scaffold5811: 6179-15352 Arabidopsis halleri
Araha.5811s0003 10.0kb upstream 10.0kb upstream 7252 false Scaffold5811: 8101-15352 Arabidopsis halleri
Araha.5811s0003 10.0kb downstream 10.0kb downstream 8100 true Scaffold5811: 1-8100 Arabidopsis halleri
Araha.5811s0003 10.0kb downstream 10.0kb downstream 6178 false Scaffold5811: 1-6178 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375401 5261 Brassicaceae View MSA
123841246 5264 Brassicales-Malvales View MSA
124338953 5266 SBM View MSA
124253453 5268 Malvidae View MSA
124071881 5270 Rosid View MSA
123745031 5271 Pentapetalae View MSA
122794273 5272 Eudicot View MSA
122048346 5273 Angiosperm View MSA
121345453 5274 Embryophyte View MSA
123424083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain