Gene : Araha.5839s0001 A. halleri v1.1

Defline:  (1 of 1) PF05859 - Mis12 protein (Mis12) Genomic Order:  1
Name:  ? Araha.5839s0001 Secondary Identifier:  ? PAC:28845785

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5839s0001 0.5kb upstream 0.5kb upstream 2301 true Scaffold5839: 119-2419 Arabidopsis halleri
Araha.5839s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5839: 1920-2419 Arabidopsis halleri
Araha.5839s0001 0.5kb downstream 0.5kb downstream 1919 true Scaffold5839: 1-1919 Arabidopsis halleri
Araha.5839s0001 0.5kb downstream 0.5kb downstream 118 false Scaffold5839: 1-118 Arabidopsis halleri
Araha.5839s0001 1.0kb upstream 1.0kb upstream 2801 true Scaffold5839: 119-2919 Arabidopsis halleri
Araha.5839s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5839: 1920-2919 Arabidopsis halleri
Araha.5839s0001 1.0kb downstream 1.0kb downstream 1919 true Scaffold5839: 1-1919 Arabidopsis halleri
Araha.5839s0001 1.0kb downstream 1.0kb downstream 118 false Scaffold5839: 1-118 Arabidopsis halleri
Araha.5839s0001 2.0kb upstream 2.0kb upstream 3801 true Scaffold5839: 119-3919 Arabidopsis halleri
Araha.5839s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5839: 1920-3919 Arabidopsis halleri
Araha.5839s0001 2.0kb downstream 2.0kb downstream 1919 true Scaffold5839: 1-1919 Arabidopsis halleri
Araha.5839s0001 2.0kb downstream 2.0kb downstream 118 false Scaffold5839: 1-118 Arabidopsis halleri
Araha.5839s0001 5.0kb upstream 5.0kb upstream 6801 true Scaffold5839: 119-6919 Arabidopsis halleri
Araha.5839s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5839: 1920-6919 Arabidopsis halleri
Araha.5839s0001 5.0kb downstream 5.0kb downstream 1919 true Scaffold5839: 1-1919 Arabidopsis halleri
Araha.5839s0001 5.0kb downstream 5.0kb downstream 118 false Scaffold5839: 1-118 Arabidopsis halleri
Araha.5839s0001 10.0kb upstream 10.0kb upstream 11801 true Scaffold5839: 119-11919 Arabidopsis halleri
Araha.5839s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold5839: 1920-11919 Arabidopsis halleri
Araha.5839s0001 10.0kb downstream 10.0kb downstream 1919 true Scaffold5839: 1-1919 Arabidopsis halleri
Araha.5839s0001 10.0kb downstream 10.0kb downstream 118 false Scaffold5839: 1-118 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364453 5261 Brassicaceae View MSA
123834046 5264 Brassicales-Malvales View MSA
124344175 5266 SBM View MSA
124238806 5268 Malvidae View MSA
124066312 5270 Rosid View MSA
123736499 5271 Pentapetalae View MSA
122790759 5272 Eudicot View MSA
122047255 5273 Angiosperm View MSA
121346479 5274 Embryophyte View MSA
123380391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain