Gene : Araha.5843s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF104 - GLUTAREDOXIN Genomic Order:  1
Name:  ? Araha.5843s0001 Secondary Identifier:  ? PAC:28842421
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri THIOREDOX-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5843s0001 0.5kb upstream 0.5kb upstream 2214 true Scaffold5843: 283-2496 Arabidopsis halleri
Araha.5843s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5843: 283-782 Arabidopsis halleri
Araha.5843s0001 0.5kb downstream 0.5kb downstream 2214 true Scaffold5843: 783-2996 Arabidopsis halleri
Araha.5843s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5843: 2497-2996 Arabidopsis halleri
Araha.5843s0001 1.0kb upstream 1.0kb upstream 2496 true Scaffold5843: 1-2496 Arabidopsis halleri
Araha.5843s0001 1.0kb upstream 1.0kb upstream 782 false Scaffold5843: 1-782 Arabidopsis halleri
Araha.5843s0001 1.0kb downstream 1.0kb downstream 2714 true Scaffold5843: 783-3496 Arabidopsis halleri
Araha.5843s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5843: 2497-3496 Arabidopsis halleri
Araha.5843s0001 2.0kb upstream 2.0kb upstream 2496 true Scaffold5843: 1-2496 Arabidopsis halleri
Araha.5843s0001 2.0kb upstream 2.0kb upstream 782 false Scaffold5843: 1-782 Arabidopsis halleri
Araha.5843s0001 2.0kb downstream 2.0kb downstream 3714 true Scaffold5843: 783-4496 Arabidopsis halleri
Araha.5843s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5843: 2497-4496 Arabidopsis halleri
Araha.5843s0001 5.0kb upstream 5.0kb upstream 2496 true Scaffold5843: 1-2496 Arabidopsis halleri
Araha.5843s0001 5.0kb upstream 5.0kb upstream 782 false Scaffold5843: 1-782 Arabidopsis halleri
Araha.5843s0001 5.0kb downstream 5.0kb downstream 6714 true Scaffold5843: 783-7496 Arabidopsis halleri
Araha.5843s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5843: 2497-7496 Arabidopsis halleri
Araha.5843s0001 10.0kb upstream 10.0kb upstream 2496 true Scaffold5843: 1-2496 Arabidopsis halleri
Araha.5843s0001 10.0kb upstream 10.0kb upstream 782 false Scaffold5843: 1-782 Arabidopsis halleri
Araha.5843s0001 10.0kb downstream 10.0kb downstream 11714 true Scaffold5843: 783-12496 Arabidopsis halleri
Araha.5843s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5843: 2497-12496 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361670 5261 Brassicaceae View MSA
123833232 5264 Brassicales-Malvales View MSA
124346532 5266 SBM View MSA
124248160 5268 Malvidae View MSA
124065401 5270 Rosid View MSA
123746542 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain