Gene : Araha.11949s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR24096:SF134 - LONG CHAIN ACYL-COA SYNTHETASE 2 Genomic Order:  1
Name:  ? Araha.11949s0001 Secondary Identifier:  ? PAC:28845354
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1121 Arabidopsis halleri pathologic  
Ahalleri PWY-321 Arabidopsis halleri pathologic  
Ahalleri PWY-5136 Arabidopsis halleri pathologic  
Ahalleri PWY-5143 Arabidopsis halleri pathologic  
Ahalleri PWY-5147 Arabidopsis halleri pathologic  
Ahalleri PWY-5156 Arabidopsis halleri pathologic  
Ahalleri PWY-561 Arabidopsis halleri pathologic  
Ahalleri PWY-5885 Arabidopsis halleri pathologic  
Ahalleri PWY-5971 Arabidopsis halleri pathologic  
Ahalleri PWY-5989 Arabidopsis halleri pathologic  
Ahalleri PWY-6733 Arabidopsis halleri pathologic  
Ahalleri PWY-6803 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11949s0001 0.5kb upstream 0.5kb upstream 5527 true Scaffold11949: 650-6176 Arabidopsis halleri
Araha.11949s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold11949: 5677-6176 Arabidopsis halleri
Araha.11949s0001 0.5kb downstream 0.5kb downstream 5527 true Scaffold11949: 150-5676 Arabidopsis halleri
Araha.11949s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold11949: 150-649 Arabidopsis halleri
Araha.11949s0001 1.0kb upstream 1.0kb upstream 6027 true Scaffold11949: 650-6676 Arabidopsis halleri
Araha.11949s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold11949: 5677-6676 Arabidopsis halleri
Araha.11949s0001 1.0kb downstream 1.0kb downstream 5676 true Scaffold11949: 1-5676 Arabidopsis halleri
Araha.11949s0001 1.0kb downstream 1.0kb downstream 649 false Scaffold11949: 1-649 Arabidopsis halleri
Araha.11949s0001 2.0kb upstream 2.0kb upstream 7027 true Scaffold11949: 650-7676 Arabidopsis halleri
Araha.11949s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold11949: 5677-7676 Arabidopsis halleri
Araha.11949s0001 2.0kb downstream 2.0kb downstream 5676 true Scaffold11949: 1-5676 Arabidopsis halleri
Araha.11949s0001 2.0kb downstream 2.0kb downstream 649 false Scaffold11949: 1-649 Arabidopsis halleri
Araha.11949s0001 5.0kb upstream 5.0kb upstream 10027 true Scaffold11949: 650-10676 Arabidopsis halleri
Araha.11949s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold11949: 5677-10676 Arabidopsis halleri
Araha.11949s0001 5.0kb downstream 5.0kb downstream 5676 true Scaffold11949: 1-5676 Arabidopsis halleri
Araha.11949s0001 5.0kb downstream 5.0kb downstream 649 false Scaffold11949: 1-649 Arabidopsis halleri
Araha.11949s0001 10.0kb upstream 10.0kb upstream 12676 true Scaffold11949: 650-13325 Arabidopsis halleri
Araha.11949s0001 10.0kb upstream 10.0kb upstream 7649 false Scaffold11949: 5677-13325 Arabidopsis halleri
Araha.11949s0001 10.0kb downstream 10.0kb downstream 5676 true Scaffold11949: 1-5676 Arabidopsis halleri
Araha.11949s0001 10.0kb downstream 10.0kb downstream 649 false Scaffold11949: 1-649 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370491 5261 Brassicaceae View MSA
123830194 5264 Brassicales-Malvales View MSA
124339284 5266 SBM View MSA
124245132 5268 Malvidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain