Gene : Araha.11900s0005 A. halleri v1.1
Defline:  (1 of 2) 3.2.2.22 - rRNA N-glycosylase / rRNA N-glycosidase Genomic Order:  5
Name:  ? Araha.11900s0005 Secondary Identifier:  ? PAC:28859110
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11900s0005 0.5kb upstream 0.5kb upstream 1942 true Scaffold11900: 28466-30407 Arabidopsis halleri
Araha.11900s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold11900: 29908-30407 Arabidopsis halleri
Araha.11900s0005 0.5kb downstream 0.5kb downstream 1942 true Scaffold11900: 27966-29907 Arabidopsis halleri
Araha.11900s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold11900: 27966-28465 Arabidopsis halleri
Araha.11900s0005 1.0kb upstream 1.0kb upstream 2442 true Scaffold11900: 28466-30907 Arabidopsis halleri
Araha.11900s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold11900: 29908-30907 Arabidopsis halleri
Araha.11900s0005 1.0kb downstream 1.0kb downstream 2442 true Scaffold11900: 27466-29907 Arabidopsis halleri
Araha.11900s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold11900: 27466-28465 Arabidopsis halleri
Araha.11900s0005 2.0kb upstream 2.0kb upstream 3442 true Scaffold11900: 28466-31907 Arabidopsis halleri
Araha.11900s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold11900: 29908-31907 Arabidopsis halleri
Araha.11900s0005 2.0kb downstream 2.0kb downstream 3442 true Scaffold11900: 26466-29907 Arabidopsis halleri
Araha.11900s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold11900: 26466-28465 Arabidopsis halleri
Araha.11900s0005 5.0kb upstream 5.0kb upstream 6442 true Scaffold11900: 28466-34907 Arabidopsis halleri
Araha.11900s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold11900: 29908-34907 Arabidopsis halleri
Araha.11900s0005 5.0kb downstream 5.0kb downstream 6442 true Scaffold11900: 23466-29907 Arabidopsis halleri
Araha.11900s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold11900: 23466-28465 Arabidopsis halleri
Araha.11900s0005 10.0kb upstream 10.0kb upstream 11442 true Scaffold11900: 28466-39907 Arabidopsis halleri
Araha.11900s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold11900: 29908-39907 Arabidopsis halleri
Araha.11900s0005 10.0kb downstream 10.0kb downstream 11442 true Scaffold11900: 18466-29907 Arabidopsis halleri
Araha.11900s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold11900: 18466-28465 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380325 5261 Brassicaceae View MSA
123802655 5264 Brassicales-Malvales View MSA
124349658 5266 SBM View MSA
124251807 5268 Malvidae View MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain