Gene : Araha.11756s0364 A. halleri v1.1
Defline:  (1 of 1) PTHR11946:SF11 - ISOLEUCINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  364
Name:  ? Araha.11756s0364 Secondary Identifier:  ? PAC:28856477
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0364 0.5kb upstream 0.5kb upstream 3323 true Scaffold11756: 524956-528278 Arabidopsis halleri
Araha.11756s0364 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 527779-528278 Arabidopsis halleri
Araha.11756s0364 0.5kb downstream 0.5kb downstream 3323 true Scaffold11756: 524456-527778 Arabidopsis halleri
Araha.11756s0364 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 524456-524955 Arabidopsis halleri
Araha.11756s0364 1.0kb upstream 1.0kb upstream 3823 true Scaffold11756: 524956-528778 Arabidopsis halleri
Araha.11756s0364 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 527779-528778 Arabidopsis halleri
Araha.11756s0364 1.0kb downstream 1.0kb downstream 3823 true Scaffold11756: 523956-527778 Arabidopsis halleri
Araha.11756s0364 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 523956-524955 Arabidopsis halleri
Araha.11756s0364 2.0kb upstream 2.0kb upstream 4823 true Scaffold11756: 524956-529778 Arabidopsis halleri
Araha.11756s0364 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 527779-529778 Arabidopsis halleri
Araha.11756s0364 2.0kb downstream 2.0kb downstream 4823 true Scaffold11756: 522956-527778 Arabidopsis halleri
Araha.11756s0364 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 522956-524955 Arabidopsis halleri
Araha.11756s0364 5.0kb upstream 5.0kb upstream 7823 true Scaffold11756: 524956-532778 Arabidopsis halleri
Araha.11756s0364 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 527779-532778 Arabidopsis halleri
Araha.11756s0364 5.0kb downstream 5.0kb downstream 7823 true Scaffold11756: 519956-527778 Arabidopsis halleri
Araha.11756s0364 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 519956-524955 Arabidopsis halleri
Araha.11756s0364 10.0kb upstream 10.0kb upstream 12823 true Scaffold11756: 524956-537778 Arabidopsis halleri
Araha.11756s0364 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 527779-537778 Arabidopsis halleri
Araha.11756s0364 10.0kb downstream 10.0kb downstream 12823 true Scaffold11756: 514956-527778 Arabidopsis halleri
Araha.11756s0364 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 514956-524955 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360799 5261 Brassicaceae View MSA
123829224 5264 Brassicales-Malvales View MSA
124344420 5266 SBM View MSA
124243360 5268 Malvidae View MSA
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain