Gene : Araha.11756s0349 A. halleri v1.1
Defline:  (1 of 1) PF02912 - Aminoacyl tRNA synthetase class II, N-terminal domain (Phe_tRNA-synt_N) Genomic Order:  349
Name:  ? Araha.11756s0349 Secondary Identifier:  ? PAC:28856362
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0349 0.5kb upstream 0.5kb upstream 1490 true Scaffold11756: 501336-502825 Arabidopsis halleri
Araha.11756s0349 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 501336-501835 Arabidopsis halleri
Araha.11756s0349 0.5kb downstream 0.5kb downstream 1490 true Scaffold11756: 501836-503325 Arabidopsis halleri
Araha.11756s0349 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 502826-503325 Arabidopsis halleri
Araha.11756s0349 1.0kb upstream 1.0kb upstream 1990 true Scaffold11756: 500836-502825 Arabidopsis halleri
Araha.11756s0349 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 500836-501835 Arabidopsis halleri
Araha.11756s0349 1.0kb downstream 1.0kb downstream 1990 true Scaffold11756: 501836-503825 Arabidopsis halleri
Araha.11756s0349 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 502826-503825 Arabidopsis halleri
Araha.11756s0349 2.0kb upstream 2.0kb upstream 2990 true Scaffold11756: 499836-502825 Arabidopsis halleri
Araha.11756s0349 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 499836-501835 Arabidopsis halleri
Araha.11756s0349 2.0kb downstream 2.0kb downstream 2990 true Scaffold11756: 501836-504825 Arabidopsis halleri
Araha.11756s0349 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 502826-504825 Arabidopsis halleri
Araha.11756s0349 5.0kb upstream 5.0kb upstream 5990 true Scaffold11756: 496836-502825 Arabidopsis halleri
Araha.11756s0349 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 496836-501835 Arabidopsis halleri
Araha.11756s0349 5.0kb downstream 5.0kb downstream 5990 true Scaffold11756: 501836-507825 Arabidopsis halleri
Araha.11756s0349 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 502826-507825 Arabidopsis halleri
Araha.11756s0349 10.0kb upstream 10.0kb upstream 10990 true Scaffold11756: 491836-502825 Arabidopsis halleri
Araha.11756s0349 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 491836-501835 Arabidopsis halleri
Araha.11756s0349 10.0kb downstream 10.0kb downstream 10990 true Scaffold11756: 501836-512825 Arabidopsis halleri
Araha.11756s0349 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 502826-512825 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121486867 5273 Angiosperm Singleton cluster - no MSA
122320592 5261 Brassicaceae Singleton cluster - no MSA
123762188 5264 Brassicales-Malvales Singleton cluster - no MSA
124260823 5266 SBM Singleton cluster - no MSA
124117443 5268 Malvidae Singleton cluster - no MSA
123846835 5270 Rosid Singleton cluster - no MSA
123433116 5271 Pentapetalae Singleton cluster - no MSA
122468736 5272 Eudicot Singleton cluster - no MSA
120760261 5274 Embryophyte Singleton cluster - no MSA
122802716 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain