Gene : Araha.11756s0342 A. halleri v1.1
Defline:  (1 of 3) 6.1.1.1 - Tyrosine--tRNA ligase / Tyrosyl-tRNA synthetase Genomic Order:  342
Name:  ? Araha.11756s0342 Secondary Identifier:  ? PAC:28856365
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0342 0.5kb upstream 0.5kb upstream 1769 true Scaffold11756: 493467-495235 Arabidopsis halleri
Araha.11756s0342 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 493467-493966 Arabidopsis halleri
Araha.11756s0342 0.5kb downstream 0.5kb downstream 1769 true Scaffold11756: 493967-495735 Arabidopsis halleri
Araha.11756s0342 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 495236-495735 Arabidopsis halleri
Araha.11756s0342 1.0kb upstream 1.0kb upstream 2269 true Scaffold11756: 492967-495235 Arabidopsis halleri
Araha.11756s0342 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 492967-493966 Arabidopsis halleri
Araha.11756s0342 1.0kb downstream 1.0kb downstream 2269 true Scaffold11756: 493967-496235 Arabidopsis halleri
Araha.11756s0342 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 495236-496235 Arabidopsis halleri
Araha.11756s0342 2.0kb upstream 2.0kb upstream 3269 true Scaffold11756: 491967-495235 Arabidopsis halleri
Araha.11756s0342 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 491967-493966 Arabidopsis halleri
Araha.11756s0342 2.0kb downstream 2.0kb downstream 3269 true Scaffold11756: 493967-497235 Arabidopsis halleri
Araha.11756s0342 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 495236-497235 Arabidopsis halleri
Araha.11756s0342 5.0kb upstream 5.0kb upstream 6269 true Scaffold11756: 488967-495235 Arabidopsis halleri
Araha.11756s0342 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 488967-493966 Arabidopsis halleri
Araha.11756s0342 5.0kb downstream 5.0kb downstream 6269 true Scaffold11756: 493967-500235 Arabidopsis halleri
Araha.11756s0342 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 495236-500235 Arabidopsis halleri
Araha.11756s0342 10.0kb upstream 10.0kb upstream 11269 true Scaffold11756: 483967-495235 Arabidopsis halleri
Araha.11756s0342 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 483967-493966 Arabidopsis halleri
Araha.11756s0342 10.0kb downstream 10.0kb downstream 11269 true Scaffold11756: 493967-505235 Arabidopsis halleri
Araha.11756s0342 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 495236-505235 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364458 5261 Brassicaceae View MSA
123830850 5264 Brassicales-Malvales View MSA
124350440 5266 SBM View MSA
124241597 5268 Malvidae View MSA
124066531 5270 Rosid View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain