Gene : Araha.11756s0335 A. halleri v1.1
Defline:  (1 of 1) KOG1247 - Methionyl-tRNA synthetase Genomic Order:  335
Name:  ? Araha.11756s0335 Secondary Identifier:  ? PAC:28856567
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0335 0.5kb upstream 0.5kb upstream 2147 true Scaffold11756: 481396-483542 Arabidopsis halleri
Araha.11756s0335 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 481396-481895 Arabidopsis halleri
Araha.11756s0335 0.5kb downstream 0.5kb downstream 2147 true Scaffold11756: 481896-484042 Arabidopsis halleri
Araha.11756s0335 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 483543-484042 Arabidopsis halleri
Araha.11756s0335 1.0kb upstream 1.0kb upstream 2647 true Scaffold11756: 480896-483542 Arabidopsis halleri
Araha.11756s0335 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 480896-481895 Arabidopsis halleri
Araha.11756s0335 1.0kb downstream 1.0kb downstream 2647 true Scaffold11756: 481896-484542 Arabidopsis halleri
Araha.11756s0335 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 483543-484542 Arabidopsis halleri
Araha.11756s0335 2.0kb upstream 2.0kb upstream 3647 true Scaffold11756: 479896-483542 Arabidopsis halleri
Araha.11756s0335 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 479896-481895 Arabidopsis halleri
Araha.11756s0335 2.0kb downstream 2.0kb downstream 3647 true Scaffold11756: 481896-485542 Arabidopsis halleri
Araha.11756s0335 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 483543-485542 Arabidopsis halleri
Araha.11756s0335 5.0kb upstream 5.0kb upstream 6647 true Scaffold11756: 476896-483542 Arabidopsis halleri
Araha.11756s0335 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 476896-481895 Arabidopsis halleri
Araha.11756s0335 5.0kb downstream 5.0kb downstream 6647 true Scaffold11756: 481896-488542 Arabidopsis halleri
Araha.11756s0335 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 483543-488542 Arabidopsis halleri
Araha.11756s0335 10.0kb upstream 10.0kb upstream 11647 true Scaffold11756: 471896-483542 Arabidopsis halleri
Araha.11756s0335 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 471896-481895 Arabidopsis halleri
Araha.11756s0335 10.0kb downstream 10.0kb downstream 11647 true Scaffold11756: 481896-493542 Arabidopsis halleri
Araha.11756s0335 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 483543-493542 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029887 5273 Angiosperm View MSA
122328147 5261 Brassicaceae View MSA
123769526 5264 Brassicales-Malvales View MSA
124268085 5266 SBM View MSA
124124344 5268 Malvidae View MSA
123853396 5270 Rosid View MSA
123753825 5271 Pentapetalae View MSA
122775265 5272 Eudicot View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain