Gene : Araha.11756s0328 A. halleri v1.1
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  328
Name:  ? Araha.11756s0328 Secondary Identifier:  ? PAC:28856659
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ARO-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6163 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0328 0.5kb upstream 0.5kb upstream 1565 true Scaffold11756: 470031-471595 Arabidopsis halleri
Araha.11756s0328 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 471096-471595 Arabidopsis halleri
Araha.11756s0328 0.5kb downstream 0.5kb downstream 1565 true Scaffold11756: 469531-471095 Arabidopsis halleri
Araha.11756s0328 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 469531-470030 Arabidopsis halleri
Araha.11756s0328 1.0kb upstream 1.0kb upstream 2065 true Scaffold11756: 470031-472095 Arabidopsis halleri
Araha.11756s0328 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 471096-472095 Arabidopsis halleri
Araha.11756s0328 1.0kb downstream 1.0kb downstream 2065 true Scaffold11756: 469031-471095 Arabidopsis halleri
Araha.11756s0328 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 469031-470030 Arabidopsis halleri
Araha.11756s0328 2.0kb upstream 2.0kb upstream 3065 true Scaffold11756: 470031-473095 Arabidopsis halleri
Araha.11756s0328 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 471096-473095 Arabidopsis halleri
Araha.11756s0328 2.0kb downstream 2.0kb downstream 3065 true Scaffold11756: 468031-471095 Arabidopsis halleri
Araha.11756s0328 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 468031-470030 Arabidopsis halleri
Araha.11756s0328 5.0kb upstream 5.0kb upstream 6065 true Scaffold11756: 470031-476095 Arabidopsis halleri
Araha.11756s0328 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 471096-476095 Arabidopsis halleri
Araha.11756s0328 5.0kb downstream 5.0kb downstream 6065 true Scaffold11756: 465031-471095 Arabidopsis halleri
Araha.11756s0328 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 465031-470030 Arabidopsis halleri
Araha.11756s0328 10.0kb upstream 10.0kb upstream 11065 true Scaffold11756: 470031-481095 Arabidopsis halleri
Araha.11756s0328 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 471096-481095 Arabidopsis halleri
Araha.11756s0328 10.0kb downstream 10.0kb downstream 11065 true Scaffold11756: 460031-471095 Arabidopsis halleri
Araha.11756s0328 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 460031-470030 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122374629 5261 Brassicaceae View MSA
123827910 5264 Brassicales-Malvales View MSA
124346296 5266 SBM View MSA
124238630 5268 Malvidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain