Gene : Araha.6003s0006 A. halleri v1.1

Defline:  (1 of 3) PTHR23284 - PROLACTIN REGULATORY ELEMENT BINDING PROTEIN Genomic Order:  6
Name:  ? Araha.6003s0006 Secondary Identifier:  ? PAC:28843220

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6003s0006 0.5kb upstream 0.5kb upstream 2999 true Scaffold6003: 45530-48528 Arabidopsis halleri
Araha.6003s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold6003: 48029-48528 Arabidopsis halleri
Araha.6003s0006 0.5kb downstream 0.5kb downstream 2999 true Scaffold6003: 45030-48028 Arabidopsis halleri
Araha.6003s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold6003: 45030-45529 Arabidopsis halleri
Araha.6003s0006 1.0kb upstream 1.0kb upstream 3499 true Scaffold6003: 45530-49028 Arabidopsis halleri
Araha.6003s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold6003: 48029-49028 Arabidopsis halleri
Araha.6003s0006 1.0kb downstream 1.0kb downstream 3499 true Scaffold6003: 44530-48028 Arabidopsis halleri
Araha.6003s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold6003: 44530-45529 Arabidopsis halleri
Araha.6003s0006 2.0kb upstream 2.0kb upstream 4499 true Scaffold6003: 45530-50028 Arabidopsis halleri
Araha.6003s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold6003: 48029-50028 Arabidopsis halleri
Araha.6003s0006 2.0kb downstream 2.0kb downstream 4499 true Scaffold6003: 43530-48028 Arabidopsis halleri
Araha.6003s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold6003: 43530-45529 Arabidopsis halleri
Araha.6003s0006 5.0kb upstream 5.0kb upstream 7499 true Scaffold6003: 45530-53028 Arabidopsis halleri
Araha.6003s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold6003: 48029-53028 Arabidopsis halleri
Araha.6003s0006 5.0kb downstream 5.0kb downstream 7499 true Scaffold6003: 40530-48028 Arabidopsis halleri
Araha.6003s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold6003: 40530-45529 Arabidopsis halleri
Araha.6003s0006 10.0kb upstream 10.0kb upstream 12499 true Scaffold6003: 45530-58028 Arabidopsis halleri
Araha.6003s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold6003: 48029-58028 Arabidopsis halleri
Araha.6003s0006 10.0kb downstream 10.0kb downstream 12499 true Scaffold6003: 35530-48028 Arabidopsis halleri
Araha.6003s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold6003: 35530-45529 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360939 5261 Brassicaceae View MSA
123831353 5264 Brassicales-Malvales View MSA
124344126 5266 SBM View MSA
124241727 5268 Malvidae View MSA
124066730 5270 Rosid View MSA
123739109 5271 Pentapetalae View MSA
122787428 5272 Eudicot View MSA
122046162 5273 Angiosperm View MSA
121350102 5274 Embryophyte View MSA
123428772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain