Gene : Araha.11756s0258 A. halleri v1.1
Defline:  (1 of 1) PTHR21000:SF11 - DIHYDROXY-ACID DEHYDRATASE Genomic Order:  258
Name:  ? Araha.11756s0258 Secondary Identifier:  ? PAC:28856259
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri BRANCHED-CHAIN-AA-SYN-PWY Arabidopsis halleri pathologic  
Ahalleri ILEUSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3001 Arabidopsis halleri pathologic  
Ahalleri VALSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0258 0.5kb upstream 0.5kb upstream 2354 true Scaffold11756: 358619-360972 Arabidopsis halleri
Araha.11756s0258 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 360473-360972 Arabidopsis halleri
Araha.11756s0258 0.5kb downstream 0.5kb downstream 2354 true Scaffold11756: 358119-360472 Arabidopsis halleri
Araha.11756s0258 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 358119-358618 Arabidopsis halleri
Araha.11756s0258 1.0kb upstream 1.0kb upstream 2854 true Scaffold11756: 358619-361472 Arabidopsis halleri
Araha.11756s0258 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 360473-361472 Arabidopsis halleri
Araha.11756s0258 1.0kb downstream 1.0kb downstream 2854 true Scaffold11756: 357619-360472 Arabidopsis halleri
Araha.11756s0258 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 357619-358618 Arabidopsis halleri
Araha.11756s0258 2.0kb upstream 2.0kb upstream 3854 true Scaffold11756: 358619-362472 Arabidopsis halleri
Araha.11756s0258 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 360473-362472 Arabidopsis halleri
Araha.11756s0258 2.0kb downstream 2.0kb downstream 3854 true Scaffold11756: 356619-360472 Arabidopsis halleri
Araha.11756s0258 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 356619-358618 Arabidopsis halleri
Araha.11756s0258 5.0kb upstream 5.0kb upstream 6854 true Scaffold11756: 358619-365472 Arabidopsis halleri
Araha.11756s0258 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 360473-365472 Arabidopsis halleri
Araha.11756s0258 5.0kb downstream 5.0kb downstream 6854 true Scaffold11756: 353619-360472 Arabidopsis halleri
Araha.11756s0258 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 353619-358618 Arabidopsis halleri
Araha.11756s0258 10.0kb upstream 10.0kb upstream 11854 true Scaffold11756: 358619-370472 Arabidopsis halleri
Araha.11756s0258 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 360473-370472 Arabidopsis halleri
Araha.11756s0258 10.0kb downstream 10.0kb downstream 11854 true Scaffold11756: 348619-360472 Arabidopsis halleri
Araha.11756s0258 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 348619-358618 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121486784 5273 Angiosperm Singleton cluster - no MSA
122320506 5261 Brassicaceae Singleton cluster - no MSA
123762105 5264 Brassicales-Malvales Singleton cluster - no MSA
124260740 5266 SBM Singleton cluster - no MSA
124117360 5268 Malvidae Singleton cluster - no MSA
123846752 5270 Rosid Singleton cluster - no MSA
123433033 5271 Pentapetalae Singleton cluster - no MSA
122468653 5272 Eudicot Singleton cluster - no MSA
120760178 5274 Embryophyte Singleton cluster - no MSA
122802637 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain