Gene : Araha.6004s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE Genomic Order:  2
Name:  ? Araha.6004s0002 Secondary Identifier:  ? PAC:28845574
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6902 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6004s0002 0.5kb upstream 0.5kb upstream 5868 true Scaffold6004: 13609-19476 Arabidopsis halleri
Araha.6004s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6004: 18977-19476 Arabidopsis halleri
Araha.6004s0002 0.5kb downstream 0.5kb downstream 5868 true Scaffold6004: 13109-18976 Arabidopsis halleri
Araha.6004s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6004: 13109-13608 Arabidopsis halleri
Araha.6004s0002 1.0kb upstream 1.0kb upstream 6368 true Scaffold6004: 13609-19976 Arabidopsis halleri
Araha.6004s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6004: 18977-19976 Arabidopsis halleri
Araha.6004s0002 1.0kb downstream 1.0kb downstream 6368 true Scaffold6004: 12609-18976 Arabidopsis halleri
Araha.6004s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6004: 12609-13608 Arabidopsis halleri
Araha.6004s0002 2.0kb upstream 2.0kb upstream 7368 true Scaffold6004: 13609-20976 Arabidopsis halleri
Araha.6004s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6004: 18977-20976 Arabidopsis halleri
Araha.6004s0002 2.0kb downstream 2.0kb downstream 7368 true Scaffold6004: 11609-18976 Arabidopsis halleri
Araha.6004s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6004: 11609-13608 Arabidopsis halleri
Araha.6004s0002 5.0kb upstream 5.0kb upstream 10368 true Scaffold6004: 13609-23976 Arabidopsis halleri
Araha.6004s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6004: 18977-23976 Arabidopsis halleri
Araha.6004s0002 5.0kb downstream 5.0kb downstream 10368 true Scaffold6004: 8609-18976 Arabidopsis halleri
Araha.6004s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6004: 8609-13608 Arabidopsis halleri
Araha.6004s0002 10.0kb upstream 10.0kb upstream 15368 true Scaffold6004: 13609-28976 Arabidopsis halleri
Araha.6004s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold6004: 18977-28976 Arabidopsis halleri
Araha.6004s0002 10.0kb downstream 10.0kb downstream 15368 true Scaffold6004: 3609-18976 Arabidopsis halleri
Araha.6004s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold6004: 3609-13608 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372069 5261 Brassicaceae View MSA
123829142 5264 Brassicales-Malvales View MSA
124337219 5266 SBM View MSA
124240714 5268 Malvidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain