Gene : Araha.5942s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  4
Name:  ? Araha.5942s0004 Secondary Identifier:  ? PAC:28846803
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6441 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5942s0004 0.5kb upstream 0.5kb upstream 3854 true Scaffold5942: 15048-18901 Arabidopsis halleri
Araha.5942s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5942: 18402-18901 Arabidopsis halleri
Araha.5942s0004 0.5kb downstream 0.5kb downstream 3854 true Scaffold5942: 14548-18401 Arabidopsis halleri
Araha.5942s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5942: 14548-15047 Arabidopsis halleri
Araha.5942s0004 1.0kb upstream 1.0kb upstream 4354 true Scaffold5942: 15048-19401 Arabidopsis halleri
Araha.5942s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5942: 18402-19401 Arabidopsis halleri
Araha.5942s0004 1.0kb downstream 1.0kb downstream 4354 true Scaffold5942: 14048-18401 Arabidopsis halleri
Araha.5942s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5942: 14048-15047 Arabidopsis halleri
Araha.5942s0004 2.0kb upstream 2.0kb upstream 5354 true Scaffold5942: 15048-20401 Arabidopsis halleri
Araha.5942s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5942: 18402-20401 Arabidopsis halleri
Araha.5942s0004 2.0kb downstream 2.0kb downstream 5354 true Scaffold5942: 13048-18401 Arabidopsis halleri
Araha.5942s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5942: 13048-15047 Arabidopsis halleri
Araha.5942s0004 5.0kb upstream 5.0kb upstream 8354 true Scaffold5942: 15048-23401 Arabidopsis halleri
Araha.5942s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5942: 18402-23401 Arabidopsis halleri
Araha.5942s0004 5.0kb downstream 5.0kb downstream 8354 true Scaffold5942: 10048-18401 Arabidopsis halleri
Araha.5942s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5942: 10048-15047 Arabidopsis halleri
Araha.5942s0004 10.0kb upstream 10.0kb upstream 13354 true Scaffold5942: 15048-28401 Arabidopsis halleri
Araha.5942s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5942: 18402-28401 Arabidopsis halleri
Araha.5942s0004 10.0kb downstream 10.0kb downstream 13354 true Scaffold5942: 5048-18401 Arabidopsis halleri
Araha.5942s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5942: 5048-15047 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362933 5261 Brassicaceae View MSA
123830834 5264 Brassicales-Malvales View MSA
124341216 5266 SBM View MSA
124237182 5268 Malvidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain