Gene : Araha.5970s0003 A. halleri v1.1
Defline:  (1 of 5) 2.3.3.16 - Citrate synthase (unknown stereospecificity) / Oxaloacetate transacetase Genomic Order:  3
Name:  ? Araha.5970s0003 Secondary Identifier:  ? PAC:28858873
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYOXYLATE-BYPASS Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-561 Arabidopsis halleri pathologic  
Ahalleri PWY-5690 Arabidopsis halleri pathologic  
Ahalleri PWY-6549 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5970s0003 0.5kb upstream 0.5kb upstream 3170 true Scaffold5970: 7878-11047 Arabidopsis halleri
Araha.5970s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5970: 7878-8377 Arabidopsis halleri
Araha.5970s0003 0.5kb downstream 0.5kb downstream 3170 true Scaffold5970: 8378-11547 Arabidopsis halleri
Araha.5970s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5970: 11048-11547 Arabidopsis halleri
Araha.5970s0003 1.0kb upstream 1.0kb upstream 3670 true Scaffold5970: 7378-11047 Arabidopsis halleri
Araha.5970s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5970: 7378-8377 Arabidopsis halleri
Araha.5970s0003 1.0kb downstream 1.0kb downstream 3670 true Scaffold5970: 8378-12047 Arabidopsis halleri
Araha.5970s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5970: 11048-12047 Arabidopsis halleri
Araha.5970s0003 2.0kb upstream 2.0kb upstream 4670 true Scaffold5970: 6378-11047 Arabidopsis halleri
Araha.5970s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5970: 6378-8377 Arabidopsis halleri
Araha.5970s0003 2.0kb downstream 2.0kb downstream 4670 true Scaffold5970: 8378-13047 Arabidopsis halleri
Araha.5970s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5970: 11048-13047 Arabidopsis halleri
Araha.5970s0003 5.0kb upstream 5.0kb upstream 7670 true Scaffold5970: 3378-11047 Arabidopsis halleri
Araha.5970s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5970: 3378-8377 Arabidopsis halleri
Araha.5970s0003 5.0kb downstream 5.0kb downstream 7670 true Scaffold5970: 8378-16047 Arabidopsis halleri
Araha.5970s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5970: 11048-16047 Arabidopsis halleri
Araha.5970s0003 10.0kb upstream 10.0kb upstream 11047 true Scaffold5970: 1-11047 Arabidopsis halleri
Araha.5970s0003 10.0kb upstream 10.0kb upstream 8377 false Scaffold5970: 1-8377 Arabidopsis halleri
Araha.5970s0003 10.0kb downstream 10.0kb downstream 12670 true Scaffold5970: 8378-21047 Arabidopsis halleri
Araha.5970s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold5970: 11048-21047 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502686 5273 Angiosperm View MSA
122343382 5261 Brassicaceae View MSA
123783602 5264 Brassicales-Malvales View MSA
124281824 5266 SBM View MSA
124136511 5268 Malvidae View MSA
123864362 5270 Rosid View MSA
123449679 5271 Pentapetalae View MSA
122485209 5272 Eudicot View MSA
120775993 5274 Embryophyte View MSA
122818280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain