Gene : Araha.12397s0008 A. halleri v1.1
Defline:  (1 of 2) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  8
Name:  ? Araha.12397s0008 Secondary Identifier:  ? PAC:28861313
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRIGLSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12397s0008 0.5kb upstream 0.5kb upstream 2928 true Scaffold12397: 33758-36685 Arabidopsis halleri
Araha.12397s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold12397: 36186-36685 Arabidopsis halleri
Araha.12397s0008 0.5kb downstream 0.5kb downstream 2928 true Scaffold12397: 33258-36185 Arabidopsis halleri
Araha.12397s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold12397: 33258-33757 Arabidopsis halleri
Araha.12397s0008 1.0kb upstream 1.0kb upstream 3428 true Scaffold12397: 33758-37185 Arabidopsis halleri
Araha.12397s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold12397: 36186-37185 Arabidopsis halleri
Araha.12397s0008 1.0kb downstream 1.0kb downstream 3428 true Scaffold12397: 32758-36185 Arabidopsis halleri
Araha.12397s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold12397: 32758-33757 Arabidopsis halleri
Araha.12397s0008 2.0kb upstream 2.0kb upstream 4428 true Scaffold12397: 33758-38185 Arabidopsis halleri
Araha.12397s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold12397: 36186-38185 Arabidopsis halleri
Araha.12397s0008 2.0kb downstream 2.0kb downstream 4428 true Scaffold12397: 31758-36185 Arabidopsis halleri
Araha.12397s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold12397: 31758-33757 Arabidopsis halleri
Araha.12397s0008 5.0kb upstream 5.0kb upstream 7428 true Scaffold12397: 33758-41185 Arabidopsis halleri
Araha.12397s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold12397: 36186-41185 Arabidopsis halleri
Araha.12397s0008 5.0kb downstream 5.0kb downstream 7428 true Scaffold12397: 28758-36185 Arabidopsis halleri
Araha.12397s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold12397: 28758-33757 Arabidopsis halleri
Araha.12397s0008 10.0kb upstream 10.0kb upstream 12428 true Scaffold12397: 33758-46185 Arabidopsis halleri
Araha.12397s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold12397: 36186-46185 Arabidopsis halleri
Araha.12397s0008 10.0kb downstream 10.0kb downstream 12428 true Scaffold12397: 23758-36185 Arabidopsis halleri
Araha.12397s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold12397: 23758-33757 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364782 5261 Brassicaceae View MSA
123833080 5264 Brassicales-Malvales View MSA
124343832 5266 SBM View MSA
124242855 5268 Malvidae View MSA
124064865 5270 Rosid View MSA
123740840 5271 Pentapetalae View MSA
122793689 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain