Gene : Araha.12581s0007 A. halleri v1.1

Defline:  (1 of 3) PTHR10071:SF156 - GATA TRANSCRIPTION FACTOR 18-RELATED Genomic Order:  7
Name:  ? Araha.12581s0007 Secondary Identifier:  ? PAC:28854848

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12581s0007 0.5kb upstream 0.5kb upstream 1954 true Scaffold12581: 25867-27820 Arabidopsis halleri
Araha.12581s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold12581: 27321-27820 Arabidopsis halleri
Araha.12581s0007 0.5kb downstream 0.5kb downstream 1954 true Scaffold12581: 25367-27320 Arabidopsis halleri
Araha.12581s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold12581: 25367-25866 Arabidopsis halleri
Araha.12581s0007 1.0kb upstream 1.0kb upstream 2454 true Scaffold12581: 25867-28320 Arabidopsis halleri
Araha.12581s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold12581: 27321-28320 Arabidopsis halleri
Araha.12581s0007 1.0kb downstream 1.0kb downstream 2454 true Scaffold12581: 24867-27320 Arabidopsis halleri
Araha.12581s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold12581: 24867-25866 Arabidopsis halleri
Araha.12581s0007 2.0kb upstream 2.0kb upstream 3454 true Scaffold12581: 25867-29320 Arabidopsis halleri
Araha.12581s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold12581: 27321-29320 Arabidopsis halleri
Araha.12581s0007 2.0kb downstream 2.0kb downstream 3454 true Scaffold12581: 23867-27320 Arabidopsis halleri
Araha.12581s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold12581: 23867-25866 Arabidopsis halleri
Araha.12581s0007 5.0kb upstream 5.0kb upstream 6454 true Scaffold12581: 25867-32320 Arabidopsis halleri
Araha.12581s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold12581: 27321-32320 Arabidopsis halleri
Araha.12581s0007 5.0kb downstream 5.0kb downstream 6454 true Scaffold12581: 20867-27320 Arabidopsis halleri
Araha.12581s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold12581: 20867-25866 Arabidopsis halleri
Araha.12581s0007 10.0kb upstream 10.0kb upstream 7720 true Scaffold12581: 25867-33586 Arabidopsis halleri
Araha.12581s0007 10.0kb upstream 10.0kb upstream 6266 false Scaffold12581: 27321-33586 Arabidopsis halleri
Araha.12581s0007 10.0kb downstream 10.0kb downstream 11454 true Scaffold12581: 15867-27320 Arabidopsis halleri
Araha.12581s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold12581: 15867-25866 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366394 5261 Brassicaceae View MSA
123834423 5264 Brassicales-Malvales View MSA
124345355 5266 SBM View MSA
124251323 5268 Malvidae View MSA
124065468 5270 Rosid View MSA
123741718 5271 Pentapetalae View MSA
122796312 5272 Eudicot View MSA
122046709 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain