Gene : Araha.12571s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  1
Name:  ? Araha.12571s0001 Secondary Identifier:  ? PAC:28845984

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12571s0001 0.5kb upstream 0.5kb upstream 2403 true Scaffold12571: 618-3020 Arabidopsis halleri
Araha.12571s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12571: 2521-3020 Arabidopsis halleri
Araha.12571s0001 0.5kb downstream 0.5kb downstream 2403 true Scaffold12571: 118-2520 Arabidopsis halleri
Araha.12571s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12571: 118-617 Arabidopsis halleri
Araha.12571s0001 1.0kb upstream 1.0kb upstream 2903 true Scaffold12571: 618-3520 Arabidopsis halleri
Araha.12571s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold12571: 2521-3520 Arabidopsis halleri
Araha.12571s0001 1.0kb downstream 1.0kb downstream 2520 true Scaffold12571: 1-2520 Arabidopsis halleri
Araha.12571s0001 1.0kb downstream 1.0kb downstream 617 false Scaffold12571: 1-617 Arabidopsis halleri
Araha.12571s0001 2.0kb upstream 2.0kb upstream 3903 true Scaffold12571: 618-4520 Arabidopsis halleri
Araha.12571s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold12571: 2521-4520 Arabidopsis halleri
Araha.12571s0001 2.0kb downstream 2.0kb downstream 2520 true Scaffold12571: 1-2520 Arabidopsis halleri
Araha.12571s0001 2.0kb downstream 2.0kb downstream 617 false Scaffold12571: 1-617 Arabidopsis halleri
Araha.12571s0001 5.0kb upstream 5.0kb upstream 6903 true Scaffold12571: 618-7520 Arabidopsis halleri
Araha.12571s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold12571: 2521-7520 Arabidopsis halleri
Araha.12571s0001 5.0kb downstream 5.0kb downstream 2520 true Scaffold12571: 1-2520 Arabidopsis halleri
Araha.12571s0001 5.0kb downstream 5.0kb downstream 617 false Scaffold12571: 1-617 Arabidopsis halleri
Araha.12571s0001 10.0kb upstream 10.0kb upstream 7874 true Scaffold12571: 618-8491 Arabidopsis halleri
Araha.12571s0001 10.0kb upstream 10.0kb upstream 5971 false Scaffold12571: 2521-8491 Arabidopsis halleri
Araha.12571s0001 10.0kb downstream 10.0kb downstream 2520 true Scaffold12571: 1-2520 Arabidopsis halleri
Araha.12571s0001 10.0kb downstream 10.0kb downstream 617 false Scaffold12571: 1-617 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363006 5261 Brassicaceae View MSA
123840716 5264 Brassicales-Malvales View MSA
124337045 5266 SBM View MSA
124240902 5268 Malvidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain