Gene : Araha.12162s0004 A. halleri v1.1
Defline:  (1 of 2) PTHR10210:SF54 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  4
Name:  ? Araha.12162s0004 Secondary Identifier:  ? PAC:28840302
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY0-662 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12162s0004 0.5kb upstream 0.5kb upstream 2848 true Scaffold12162: 4887-7734 Arabidopsis halleri
Araha.12162s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold12162: 4887-5386 Arabidopsis halleri
Araha.12162s0004 0.5kb downstream 0.5kb downstream 2848 true Scaffold12162: 5387-8234 Arabidopsis halleri
Araha.12162s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold12162: 7735-8234 Arabidopsis halleri
Araha.12162s0004 1.0kb upstream 1.0kb upstream 3348 true Scaffold12162: 4387-7734 Arabidopsis halleri
Araha.12162s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold12162: 4387-5386 Arabidopsis halleri
Araha.12162s0004 1.0kb downstream 1.0kb downstream 3348 true Scaffold12162: 5387-8734 Arabidopsis halleri
Araha.12162s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold12162: 7735-8734 Arabidopsis halleri
Araha.12162s0004 2.0kb upstream 2.0kb upstream 4348 true Scaffold12162: 3387-7734 Arabidopsis halleri
Araha.12162s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold12162: 3387-5386 Arabidopsis halleri
Araha.12162s0004 2.0kb downstream 2.0kb downstream 4348 true Scaffold12162: 5387-9734 Arabidopsis halleri
Araha.12162s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold12162: 7735-9734 Arabidopsis halleri
Araha.12162s0004 5.0kb upstream 5.0kb upstream 7348 true Scaffold12162: 387-7734 Arabidopsis halleri
Araha.12162s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold12162: 387-5386 Arabidopsis halleri
Araha.12162s0004 5.0kb downstream 5.0kb downstream 7348 true Scaffold12162: 5387-12734 Arabidopsis halleri
Araha.12162s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold12162: 7735-12734 Arabidopsis halleri
Araha.12162s0004 10.0kb upstream 10.0kb upstream 7734 true Scaffold12162: 1-7734 Arabidopsis halleri
Araha.12162s0004 10.0kb upstream 10.0kb upstream 5386 false Scaffold12162: 1-5386 Arabidopsis halleri
Araha.12162s0004 10.0kb downstream 10.0kb downstream 11771 true Scaffold12162: 5387-17157 Arabidopsis halleri
Araha.12162s0004 10.0kb downstream 10.0kb downstream 9423 false Scaffold12162: 7735-17157 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371418 5261 Brassicaceae View MSA
123839095 5264 Brassicales-Malvales View MSA
124346548 5266 SBM View MSA
124240392 5268 Malvidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain