Gene : Araha.12224s0008 A. halleri v1.1

Defline:  (1 of 3) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  8
Name:  ? Araha.12224s0008 Secondary Identifier:  ? PAC:28836941

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5381 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12224s0008 0.5kb upstream 0.5kb upstream 3235 true Scaffold12224: 48442-51676 Arabidopsis halleri
Araha.12224s0008 0.5kb upstream 0.5kb upstream 1 false Scaffold12224: 51676-51676 Arabidopsis halleri
Araha.12224s0008 0.5kb downstream 0.5kb downstream 3734 true Scaffold12224: 47942-51675 Arabidopsis halleri
Araha.12224s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold12224: 47942-48441 Arabidopsis halleri
Araha.12224s0008 1.0kb upstream 1.0kb upstream 3235 true Scaffold12224: 48442-51676 Arabidopsis halleri
Araha.12224s0008 1.0kb upstream 1.0kb upstream 1 false Scaffold12224: 51676-51676 Arabidopsis halleri
Araha.12224s0008 1.0kb downstream 1.0kb downstream 4234 true Scaffold12224: 47442-51675 Arabidopsis halleri
Araha.12224s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold12224: 47442-48441 Arabidopsis halleri
Araha.12224s0008 2.0kb upstream 2.0kb upstream 3235 true Scaffold12224: 48442-51676 Arabidopsis halleri
Araha.12224s0008 2.0kb upstream 2.0kb upstream 1 false Scaffold12224: 51676-51676 Arabidopsis halleri
Araha.12224s0008 2.0kb downstream 2.0kb downstream 5234 true Scaffold12224: 46442-51675 Arabidopsis halleri
Araha.12224s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold12224: 46442-48441 Arabidopsis halleri
Araha.12224s0008 5.0kb upstream 5.0kb upstream 3235 true Scaffold12224: 48442-51676 Arabidopsis halleri
Araha.12224s0008 5.0kb upstream 5.0kb upstream 1 false Scaffold12224: 51676-51676 Arabidopsis halleri
Araha.12224s0008 5.0kb downstream 5.0kb downstream 8234 true Scaffold12224: 43442-51675 Arabidopsis halleri
Araha.12224s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold12224: 43442-48441 Arabidopsis halleri
Araha.12224s0008 10.0kb upstream 10.0kb upstream 3235 true Scaffold12224: 48442-51676 Arabidopsis halleri
Araha.12224s0008 10.0kb upstream 10.0kb upstream 1 false Scaffold12224: 51676-51676 Arabidopsis halleri
Araha.12224s0008 10.0kb downstream 10.0kb downstream 13234 true Scaffold12224: 38442-51675 Arabidopsis halleri
Araha.12224s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold12224: 38442-48441 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374213 5261 Brassicaceae View MSA
123838149 5264 Brassicales-Malvales View MSA
124348099 5266 SBM View MSA
124237112 5268 Malvidae View MSA
124065117 5270 Rosid View MSA
123744926 5271 Pentapetalae View MSA
122787936 5272 Eudicot View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain