Gene : Araha.12821s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Genomic Order:  1
Name:  ? Araha.12821s0001 Secondary Identifier:  ? PAC:28859176

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12821s0001 0.5kb upstream 0.5kb upstream 6123 true Scaffold12821: 5670-11792 Arabidopsis halleri
Araha.12821s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12821: 11293-11792 Arabidopsis halleri
Araha.12821s0001 0.5kb downstream 0.5kb downstream 6123 true Scaffold12821: 5170-11292 Arabidopsis halleri
Araha.12821s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12821: 5170-5669 Arabidopsis halleri
Araha.12821s0001 1.0kb upstream 1.0kb upstream 6623 true Scaffold12821: 5670-12292 Arabidopsis halleri
Araha.12821s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold12821: 11293-12292 Arabidopsis halleri
Araha.12821s0001 1.0kb downstream 1.0kb downstream 6623 true Scaffold12821: 4670-11292 Arabidopsis halleri
Araha.12821s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12821: 4670-5669 Arabidopsis halleri
Araha.12821s0001 2.0kb upstream 2.0kb upstream 7623 true Scaffold12821: 5670-13292 Arabidopsis halleri
Araha.12821s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold12821: 11293-13292 Arabidopsis halleri
Araha.12821s0001 2.0kb downstream 2.0kb downstream 7623 true Scaffold12821: 3670-11292 Arabidopsis halleri
Araha.12821s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12821: 3670-5669 Arabidopsis halleri
Araha.12821s0001 5.0kb upstream 5.0kb upstream 10623 true Scaffold12821: 5670-16292 Arabidopsis halleri
Araha.12821s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold12821: 11293-16292 Arabidopsis halleri
Araha.12821s0001 5.0kb downstream 5.0kb downstream 10623 true Scaffold12821: 670-11292 Arabidopsis halleri
Araha.12821s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold12821: 670-5669 Arabidopsis halleri
Araha.12821s0001 10.0kb upstream 10.0kb upstream 15623 true Scaffold12821: 5670-21292 Arabidopsis halleri
Araha.12821s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold12821: 11293-21292 Arabidopsis halleri
Araha.12821s0001 10.0kb downstream 10.0kb downstream 11292 true Scaffold12821: 1-11292 Arabidopsis halleri
Araha.12821s0001 10.0kb downstream 10.0kb downstream 5669 false Scaffold12821: 1-5669 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364675 5261 Brassicaceae View MSA
123832054 5264 Brassicales-Malvales View MSA
124341887 5266 SBM View MSA
124240540 5268 Malvidae View MSA
124074253 5270 Rosid View MSA
123741862 5271 Pentapetalae View MSA
122790393 5272 Eudicot View MSA
122044386 5273 Angiosperm View MSA
121345400 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain