Gene : Araha.6382s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR12103:SF12 - 5'-NUCLEOTIDASE DOMAIN-CONTAINING PROTEIN DDB_G0275467 Genomic Order:  3
Name:  ? Araha.6382s0003 Secondary Identifier:  ? PAC:28850143

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5381 Arabidopsis halleri pathologic  
Ahalleri PWY-5695 Arabidopsis halleri pathologic  
Ahalleri PWY-6596 Arabidopsis halleri pathologic  
Ahalleri PWY-6606 Arabidopsis halleri pathologic  
Ahalleri PWY-6608 Arabidopsis halleri pathologic  
Ahalleri PWY-7185 Arabidopsis halleri pathologic  
Ahalleri SALVADEHYPOX-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6382s0003 0.5kb upstream 0.5kb upstream 3605 true Scaffold6382: 8201-11805 Arabidopsis halleri
Araha.6382s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6382: 11306-11805 Arabidopsis halleri
Araha.6382s0003 0.5kb downstream 0.5kb downstream 3605 true Scaffold6382: 7701-11305 Arabidopsis halleri
Araha.6382s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6382: 7701-8200 Arabidopsis halleri
Araha.6382s0003 1.0kb upstream 1.0kb upstream 4105 true Scaffold6382: 8201-12305 Arabidopsis halleri
Araha.6382s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6382: 11306-12305 Arabidopsis halleri
Araha.6382s0003 1.0kb downstream 1.0kb downstream 4105 true Scaffold6382: 7201-11305 Arabidopsis halleri
Araha.6382s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6382: 7201-8200 Arabidopsis halleri
Araha.6382s0003 2.0kb upstream 2.0kb upstream 5105 true Scaffold6382: 8201-13305 Arabidopsis halleri
Araha.6382s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6382: 11306-13305 Arabidopsis halleri
Araha.6382s0003 2.0kb downstream 2.0kb downstream 5105 true Scaffold6382: 6201-11305 Arabidopsis halleri
Araha.6382s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6382: 6201-8200 Arabidopsis halleri
Araha.6382s0003 5.0kb upstream 5.0kb upstream 5807 true Scaffold6382: 8201-14007 Arabidopsis halleri
Araha.6382s0003 5.0kb upstream 5.0kb upstream 2702 false Scaffold6382: 11306-14007 Arabidopsis halleri
Araha.6382s0003 5.0kb downstream 5.0kb downstream 8105 true Scaffold6382: 3201-11305 Arabidopsis halleri
Araha.6382s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6382: 3201-8200 Arabidopsis halleri
Araha.6382s0003 10.0kb upstream 10.0kb upstream 5807 true Scaffold6382: 8201-14007 Arabidopsis halleri
Araha.6382s0003 10.0kb upstream 10.0kb upstream 2702 false Scaffold6382: 11306-14007 Arabidopsis halleri
Araha.6382s0003 10.0kb downstream 10.0kb downstream 11305 true Scaffold6382: 1-11305 Arabidopsis halleri
Araha.6382s0003 10.0kb downstream 10.0kb downstream 8200 false Scaffold6382: 1-8200 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369705 5261 Brassicaceae View MSA
123828548 5264 Brassicales-Malvales View MSA
124338760 5266 SBM View MSA
124239733 5268 Malvidae View MSA
124062201 5270 Rosid View MSA
123740531 5271 Pentapetalae View MSA
122793473 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain