Gene : Araha.6352s0003 A. halleri v1.1

Defline:  (1 of 3) PTHR31636:SF38 - SCARECROW-LIKE PROTEIN 21-RELATED Genomic Order:  3
Name:  ? Araha.6352s0003 Secondary Identifier:  ? PAC:28857727

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6352s0003 0.5kb upstream 0.5kb upstream 2857 true Scaffold6352: 24675-27531 Arabidopsis halleri
Araha.6352s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6352: 27032-27531 Arabidopsis halleri
Araha.6352s0003 0.5kb downstream 0.5kb downstream 2857 true Scaffold6352: 24175-27031 Arabidopsis halleri
Araha.6352s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6352: 24175-24674 Arabidopsis halleri
Araha.6352s0003 1.0kb upstream 1.0kb upstream 3357 true Scaffold6352: 24675-28031 Arabidopsis halleri
Araha.6352s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6352: 27032-28031 Arabidopsis halleri
Araha.6352s0003 1.0kb downstream 1.0kb downstream 3357 true Scaffold6352: 23675-27031 Arabidopsis halleri
Araha.6352s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6352: 23675-24674 Arabidopsis halleri
Araha.6352s0003 2.0kb upstream 2.0kb upstream 4357 true Scaffold6352: 24675-29031 Arabidopsis halleri
Araha.6352s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6352: 27032-29031 Arabidopsis halleri
Araha.6352s0003 2.0kb downstream 2.0kb downstream 4357 true Scaffold6352: 22675-27031 Arabidopsis halleri
Araha.6352s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6352: 22675-24674 Arabidopsis halleri
Araha.6352s0003 5.0kb upstream 5.0kb upstream 4546 true Scaffold6352: 24675-29220 Arabidopsis halleri
Araha.6352s0003 5.0kb upstream 5.0kb upstream 2189 false Scaffold6352: 27032-29220 Arabidopsis halleri
Araha.6352s0003 5.0kb downstream 5.0kb downstream 7357 true Scaffold6352: 19675-27031 Arabidopsis halleri
Araha.6352s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6352: 19675-24674 Arabidopsis halleri
Araha.6352s0003 10.0kb upstream 10.0kb upstream 4546 true Scaffold6352: 24675-29220 Arabidopsis halleri
Araha.6352s0003 10.0kb upstream 10.0kb upstream 2189 false Scaffold6352: 27032-29220 Arabidopsis halleri
Araha.6352s0003 10.0kb downstream 10.0kb downstream 12357 true Scaffold6352: 14675-27031 Arabidopsis halleri
Araha.6352s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold6352: 14675-24674 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373902 5261 Brassicaceae View MSA
123829401 5264 Brassicales-Malvales View MSA
124351276 5266 SBM View MSA
124250655 5268 Malvidae View MSA
124064527 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain