Gene : Araha.6352s0002 A. halleri v1.1
Defline:  (1 of 3) PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  2
Name:  ? Araha.6352s0002 Secondary Identifier:  ? PAC:28857725
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6352s0002 0.5kb upstream 0.5kb upstream 1987 true Scaffold6352: 18032-20018 Arabidopsis halleri
Araha.6352s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6352: 19519-20018 Arabidopsis halleri
Araha.6352s0002 0.5kb downstream 0.5kb downstream 1987 true Scaffold6352: 17532-19518 Arabidopsis halleri
Araha.6352s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6352: 17532-18031 Arabidopsis halleri
Araha.6352s0002 1.0kb upstream 1.0kb upstream 2487 true Scaffold6352: 18032-20518 Arabidopsis halleri
Araha.6352s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6352: 19519-20518 Arabidopsis halleri
Araha.6352s0002 1.0kb downstream 1.0kb downstream 2487 true Scaffold6352: 17032-19518 Arabidopsis halleri
Araha.6352s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6352: 17032-18031 Arabidopsis halleri
Araha.6352s0002 2.0kb upstream 2.0kb upstream 3487 true Scaffold6352: 18032-21518 Arabidopsis halleri
Araha.6352s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6352: 19519-21518 Arabidopsis halleri
Araha.6352s0002 2.0kb downstream 2.0kb downstream 3487 true Scaffold6352: 16032-19518 Arabidopsis halleri
Araha.6352s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6352: 16032-18031 Arabidopsis halleri
Araha.6352s0002 5.0kb upstream 5.0kb upstream 6487 true Scaffold6352: 18032-24518 Arabidopsis halleri
Araha.6352s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6352: 19519-24518 Arabidopsis halleri
Araha.6352s0002 5.0kb downstream 5.0kb downstream 6487 true Scaffold6352: 13032-19518 Arabidopsis halleri
Araha.6352s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6352: 13032-18031 Arabidopsis halleri
Araha.6352s0002 10.0kb upstream 10.0kb upstream 11189 true Scaffold6352: 18032-29220 Arabidopsis halleri
Araha.6352s0002 10.0kb upstream 10.0kb upstream 9702 false Scaffold6352: 19519-29220 Arabidopsis halleri
Araha.6352s0002 10.0kb downstream 10.0kb downstream 11487 true Scaffold6352: 8032-19518 Arabidopsis halleri
Araha.6352s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold6352: 8032-18031 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376211 5261 Brassicaceae View MSA
123841196 5264 Brassicales-Malvales View MSA
124349703 5266 SBM View MSA
124252748 5268 Malvidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain