Gene : Araha.12732s0023 A. halleri v1.1

Defline:  (1 of 2) PTHR18952:SF118 - ALPHA CARBONIC ANHYDRASE 6 Genomic Order:  23
Name:  ? Araha.12732s0023 Secondary Identifier:  ? PAC:28837536

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-241 Arabidopsis halleri pathologic  
Ahalleri PWY-7115 Arabidopsis halleri pathologic  
Ahalleri PWY-7117 Arabidopsis halleri pathologic  
Ahalleri PWYQT-4429 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12732s0023 0.5kb upstream 0.5kb upstream 1871 true Scaffold12732: 96462-98332 Arabidopsis halleri
Araha.12732s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold12732: 96462-96961 Arabidopsis halleri
Araha.12732s0023 0.5kb downstream 0.5kb downstream 1871 true Scaffold12732: 96962-98832 Arabidopsis halleri
Araha.12732s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold12732: 98333-98832 Arabidopsis halleri
Araha.12732s0023 1.0kb upstream 1.0kb upstream 2371 true Scaffold12732: 95962-98332 Arabidopsis halleri
Araha.12732s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold12732: 95962-96961 Arabidopsis halleri
Araha.12732s0023 1.0kb downstream 1.0kb downstream 2371 true Scaffold12732: 96962-99332 Arabidopsis halleri
Araha.12732s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold12732: 98333-99332 Arabidopsis halleri
Araha.12732s0023 2.0kb upstream 2.0kb upstream 3371 true Scaffold12732: 94962-98332 Arabidopsis halleri
Araha.12732s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold12732: 94962-96961 Arabidopsis halleri
Araha.12732s0023 2.0kb downstream 2.0kb downstream 3371 true Scaffold12732: 96962-100332 Arabidopsis halleri
Araha.12732s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold12732: 98333-100332 Arabidopsis halleri
Araha.12732s0023 5.0kb upstream 5.0kb upstream 6371 true Scaffold12732: 91962-98332 Arabidopsis halleri
Araha.12732s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold12732: 91962-96961 Arabidopsis halleri
Araha.12732s0023 5.0kb downstream 5.0kb downstream 6371 true Scaffold12732: 96962-103332 Arabidopsis halleri
Araha.12732s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold12732: 98333-103332 Arabidopsis halleri
Araha.12732s0023 10.0kb upstream 10.0kb upstream 11371 true Scaffold12732: 86962-98332 Arabidopsis halleri
Araha.12732s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold12732: 86962-96961 Arabidopsis halleri
Araha.12732s0023 10.0kb downstream 10.0kb downstream 11371 true Scaffold12732: 96962-108332 Arabidopsis halleri
Araha.12732s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold12732: 98333-108332 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367124 5261 Brassicaceae View MSA
123829371 5264 Brassicales-Malvales View MSA
124339890 5266 SBM View MSA
124254453 5268 Malvidae View MSA
124067085 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain