Gene : Araha.12684s0003 A. halleri v1.1

Defline:  (1 of 8) KOG2922 - Uncharacterized conserved protein Genomic Order:  3
Name:  ? Araha.12684s0003 Secondary Identifier:  ? PAC:28840962

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12684s0003 0.5kb upstream 0.5kb upstream 3746 true Scaffold12684: 24862-28607 Arabidopsis halleri
Araha.12684s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold12684: 28108-28607 Arabidopsis halleri
Araha.12684s0003 0.5kb downstream 0.5kb downstream 3746 true Scaffold12684: 24362-28107 Arabidopsis halleri
Araha.12684s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold12684: 24362-24861 Arabidopsis halleri
Araha.12684s0003 1.0kb upstream 1.0kb upstream 4246 true Scaffold12684: 24862-29107 Arabidopsis halleri
Araha.12684s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold12684: 28108-29107 Arabidopsis halleri
Araha.12684s0003 1.0kb downstream 1.0kb downstream 4246 true Scaffold12684: 23862-28107 Arabidopsis halleri
Araha.12684s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold12684: 23862-24861 Arabidopsis halleri
Araha.12684s0003 2.0kb upstream 2.0kb upstream 5246 true Scaffold12684: 24862-30107 Arabidopsis halleri
Araha.12684s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold12684: 28108-30107 Arabidopsis halleri
Araha.12684s0003 2.0kb downstream 2.0kb downstream 5246 true Scaffold12684: 22862-28107 Arabidopsis halleri
Araha.12684s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold12684: 22862-24861 Arabidopsis halleri
Araha.12684s0003 5.0kb upstream 5.0kb upstream 7122 true Scaffold12684: 24862-31983 Arabidopsis halleri
Araha.12684s0003 5.0kb upstream 5.0kb upstream 3876 false Scaffold12684: 28108-31983 Arabidopsis halleri
Araha.12684s0003 5.0kb downstream 5.0kb downstream 8246 true Scaffold12684: 19862-28107 Arabidopsis halleri
Araha.12684s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold12684: 19862-24861 Arabidopsis halleri
Araha.12684s0003 10.0kb upstream 10.0kb upstream 7122 true Scaffold12684: 24862-31983 Arabidopsis halleri
Araha.12684s0003 10.0kb upstream 10.0kb upstream 3876 false Scaffold12684: 28108-31983 Arabidopsis halleri
Araha.12684s0003 10.0kb downstream 10.0kb downstream 13246 true Scaffold12684: 14862-28107 Arabidopsis halleri
Araha.12684s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold12684: 14862-24861 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343134 5261 Brassicaceae View MSA
123783424 5264 Brassicales-Malvales View MSA
124281659 5266 SBM View MSA
124136379 5268 Malvidae View MSA
123864249 5270 Rosid View MSA
123742244 5271 Pentapetalae View MSA
122790417 5272 Eudicot View MSA
122049852 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain