Gene : Araha.12666s0020 A. halleri v1.1
Defline:  (1 of 1) PF04428 - Choline kinase N terminus (Choline_kin_N) Genomic Order:  20
Name:  ? Araha.12666s0020 Secondary Identifier:  ? PAC:28855304
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3385 Arabidopsis halleri pathologic  
Ahalleri PWY4FS-6 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12666s0020 0.5kb upstream 0.5kb upstream 2591 true Scaffold12666: 72098-74688 Arabidopsis halleri
Araha.12666s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold12666: 74189-74688 Arabidopsis halleri
Araha.12666s0020 0.5kb downstream 0.5kb downstream 2591 true Scaffold12666: 71598-74188 Arabidopsis halleri
Araha.12666s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold12666: 71598-72097 Arabidopsis halleri
Araha.12666s0020 1.0kb upstream 1.0kb upstream 3091 true Scaffold12666: 72098-75188 Arabidopsis halleri
Araha.12666s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold12666: 74189-75188 Arabidopsis halleri
Araha.12666s0020 1.0kb downstream 1.0kb downstream 3091 true Scaffold12666: 71098-74188 Arabidopsis halleri
Araha.12666s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold12666: 71098-72097 Arabidopsis halleri
Araha.12666s0020 2.0kb upstream 2.0kb upstream 4091 true Scaffold12666: 72098-76188 Arabidopsis halleri
Araha.12666s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold12666: 74189-76188 Arabidopsis halleri
Araha.12666s0020 2.0kb downstream 2.0kb downstream 4091 true Scaffold12666: 70098-74188 Arabidopsis halleri
Araha.12666s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold12666: 70098-72097 Arabidopsis halleri
Araha.12666s0020 5.0kb upstream 5.0kb upstream 7091 true Scaffold12666: 72098-79188 Arabidopsis halleri
Araha.12666s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold12666: 74189-79188 Arabidopsis halleri
Araha.12666s0020 5.0kb downstream 5.0kb downstream 7091 true Scaffold12666: 67098-74188 Arabidopsis halleri
Araha.12666s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold12666: 67098-72097 Arabidopsis halleri
Araha.12666s0020 10.0kb upstream 10.0kb upstream 11082 true Scaffold12666: 72098-83179 Arabidopsis halleri
Araha.12666s0020 10.0kb upstream 10.0kb upstream 8991 false Scaffold12666: 74189-83179 Arabidopsis halleri
Araha.12666s0020 10.0kb downstream 10.0kb downstream 12091 true Scaffold12666: 62098-74188 Arabidopsis halleri
Araha.12666s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold12666: 62098-72097 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363118 5261 Brassicaceae View MSA
123840519 5264 Brassicales-Malvales View MSA
124340711 5266 SBM View MSA
124247486 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain