Gene : Araha.13393s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR31580:SF4 - FILAMENT-LIKE PLANT PROTEIN 4-RELATED Genomic Order:  1
Name:  ? Araha.13393s0001 Secondary Identifier:  ? PAC:28842531

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13393s0001 0.5kb upstream 0.5kb upstream 4336 true Scaffold13393: 1-4336 Arabidopsis halleri
Araha.13393s0001 0.5kb upstream 0.5kb upstream 237 false Scaffold13393: 1-237 Arabidopsis halleri
Araha.13393s0001 0.5kb downstream 0.5kb downstream 4599 true Scaffold13393: 238-4836 Arabidopsis halleri
Araha.13393s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13393: 4337-4836 Arabidopsis halleri
Araha.13393s0001 1.0kb upstream 1.0kb upstream 4336 true Scaffold13393: 1-4336 Arabidopsis halleri
Araha.13393s0001 1.0kb upstream 1.0kb upstream 237 false Scaffold13393: 1-237 Arabidopsis halleri
Araha.13393s0001 1.0kb downstream 1.0kb downstream 5099 true Scaffold13393: 238-5336 Arabidopsis halleri
Araha.13393s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold13393: 4337-5336 Arabidopsis halleri
Araha.13393s0001 2.0kb upstream 2.0kb upstream 4336 true Scaffold13393: 1-4336 Arabidopsis halleri
Araha.13393s0001 2.0kb upstream 2.0kb upstream 237 false Scaffold13393: 1-237 Arabidopsis halleri
Araha.13393s0001 2.0kb downstream 2.0kb downstream 6099 true Scaffold13393: 238-6336 Arabidopsis halleri
Araha.13393s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold13393: 4337-6336 Arabidopsis halleri
Araha.13393s0001 5.0kb upstream 5.0kb upstream 4336 true Scaffold13393: 1-4336 Arabidopsis halleri
Araha.13393s0001 5.0kb upstream 5.0kb upstream 237 false Scaffold13393: 1-237 Arabidopsis halleri
Araha.13393s0001 5.0kb downstream 5.0kb downstream 9099 true Scaffold13393: 238-9336 Arabidopsis halleri
Araha.13393s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold13393: 4337-9336 Arabidopsis halleri
Araha.13393s0001 10.0kb upstream 10.0kb upstream 4336 true Scaffold13393: 1-4336 Arabidopsis halleri
Araha.13393s0001 10.0kb upstream 10.0kb upstream 237 false Scaffold13393: 1-237 Arabidopsis halleri
Araha.13393s0001 10.0kb downstream 10.0kb downstream 14099 true Scaffold13393: 238-14336 Arabidopsis halleri
Araha.13393s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold13393: 4337-14336 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376760 5261 Brassicaceae View MSA
123831153 5264 Brassicales-Malvales View MSA
124321715 5266 SBM View MSA
124252265 5268 Malvidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain