Gene : Araha.13031s0003 A. halleri v1.1
Defline:  (1 of 2) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  3
Name:  ? Araha.13031s0003 Secondary Identifier:  ? PAC:28857966
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5129 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13031s0003 0.5kb upstream 0.5kb upstream 4832 true Scaffold13031: 19305-24136 Arabidopsis halleri
Araha.13031s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold13031: 19305-19804 Arabidopsis halleri
Araha.13031s0003 0.5kb downstream 0.5kb downstream 4832 true Scaffold13031: 19805-24636 Arabidopsis halleri
Araha.13031s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold13031: 24137-24636 Arabidopsis halleri
Araha.13031s0003 1.0kb upstream 1.0kb upstream 5332 true Scaffold13031: 18805-24136 Arabidopsis halleri
Araha.13031s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold13031: 18805-19804 Arabidopsis halleri
Araha.13031s0003 1.0kb downstream 1.0kb downstream 5332 true Scaffold13031: 19805-25136 Arabidopsis halleri
Araha.13031s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold13031: 24137-25136 Arabidopsis halleri
Araha.13031s0003 2.0kb upstream 2.0kb upstream 6332 true Scaffold13031: 17805-24136 Arabidopsis halleri
Araha.13031s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold13031: 17805-19804 Arabidopsis halleri
Araha.13031s0003 2.0kb downstream 2.0kb downstream 6332 true Scaffold13031: 19805-26136 Arabidopsis halleri
Araha.13031s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold13031: 24137-26136 Arabidopsis halleri
Araha.13031s0003 5.0kb upstream 5.0kb upstream 9332 true Scaffold13031: 14805-24136 Arabidopsis halleri
Araha.13031s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold13031: 14805-19804 Arabidopsis halleri
Araha.13031s0003 5.0kb downstream 5.0kb downstream 8427 true Scaffold13031: 19805-28231 Arabidopsis halleri
Araha.13031s0003 5.0kb downstream 5.0kb downstream 4095 false Scaffold13031: 24137-28231 Arabidopsis halleri
Araha.13031s0003 10.0kb upstream 10.0kb upstream 14332 true Scaffold13031: 9805-24136 Arabidopsis halleri
Araha.13031s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold13031: 9805-19804 Arabidopsis halleri
Araha.13031s0003 10.0kb downstream 10.0kb downstream 8427 true Scaffold13031: 19805-28231 Arabidopsis halleri
Araha.13031s0003 10.0kb downstream 10.0kb downstream 4095 false Scaffold13031: 24137-28231 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365978 5261 Brassicaceae View MSA
123830936 5264 Brassicales-Malvales View MSA
124346384 5266 SBM View MSA
124251685 5268 Malvidae View MSA
124066629 5270 Rosid View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain