Gene : Araha.12988s0005 A. halleri v1.1

Defline:  (1 of 3) PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED Genomic Order:  5
Name:  ? Araha.12988s0005 Secondary Identifier:  ? PAC:28846471

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12988s0005 0.5kb upstream 0.5kb upstream 3193 true Scaffold12988: 24677-27869 Arabidopsis halleri
Araha.12988s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold12988: 24677-25176 Arabidopsis halleri
Araha.12988s0005 0.5kb downstream 0.5kb downstream 3193 true Scaffold12988: 25177-28369 Arabidopsis halleri
Araha.12988s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold12988: 27870-28369 Arabidopsis halleri
Araha.12988s0005 1.0kb upstream 1.0kb upstream 3693 true Scaffold12988: 24177-27869 Arabidopsis halleri
Araha.12988s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold12988: 24177-25176 Arabidopsis halleri
Araha.12988s0005 1.0kb downstream 1.0kb downstream 3693 true Scaffold12988: 25177-28869 Arabidopsis halleri
Araha.12988s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold12988: 27870-28869 Arabidopsis halleri
Araha.12988s0005 2.0kb upstream 2.0kb upstream 4693 true Scaffold12988: 23177-27869 Arabidopsis halleri
Araha.12988s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold12988: 23177-25176 Arabidopsis halleri
Araha.12988s0005 2.0kb downstream 2.0kb downstream 4693 true Scaffold12988: 25177-29869 Arabidopsis halleri
Araha.12988s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold12988: 27870-29869 Arabidopsis halleri
Araha.12988s0005 5.0kb upstream 5.0kb upstream 7693 true Scaffold12988: 20177-27869 Arabidopsis halleri
Araha.12988s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold12988: 20177-25176 Arabidopsis halleri
Araha.12988s0005 5.0kb downstream 5.0kb downstream 7693 true Scaffold12988: 25177-32869 Arabidopsis halleri
Araha.12988s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold12988: 27870-32869 Arabidopsis halleri
Araha.12988s0005 10.0kb upstream 10.0kb upstream 12693 true Scaffold12988: 15177-27869 Arabidopsis halleri
Araha.12988s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold12988: 15177-25176 Arabidopsis halleri
Araha.12988s0005 10.0kb downstream 10.0kb downstream 12693 true Scaffold12988: 25177-37869 Arabidopsis halleri
Araha.12988s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold12988: 27870-37869 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377807 5261 Brassicaceae View MSA
123836968 5264 Brassicales-Malvales View MSA
124341876 5266 SBM View MSA
124238307 5268 Malvidae View MSA
124061446 5270 Rosid View MSA
123736645 5271 Pentapetalae View MSA
122794174 5272 Eudicot View MSA
122049979 5273 Angiosperm View MSA
121351662 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain