Gene : Araha.6616s0004 A. halleri v1.1
Defline:  (1 of 1) 1.1.1.25//4.2.1.10 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  4
Name:  ? Araha.6616s0004 Secondary Identifier:  ? PAC:28841030
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ARO-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6163 Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6616s0004 0.5kb upstream 0.5kb upstream 3672 true Scaffold6616: 11925-15596 Arabidopsis halleri
Araha.6616s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6616: 15097-15596 Arabidopsis halleri
Araha.6616s0004 0.5kb downstream 0.5kb downstream 3672 true Scaffold6616: 11425-15096 Arabidopsis halleri
Araha.6616s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6616: 11425-11924 Arabidopsis halleri
Araha.6616s0004 1.0kb upstream 1.0kb upstream 4172 true Scaffold6616: 11925-16096 Arabidopsis halleri
Araha.6616s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6616: 15097-16096 Arabidopsis halleri
Araha.6616s0004 1.0kb downstream 1.0kb downstream 4172 true Scaffold6616: 10925-15096 Arabidopsis halleri
Araha.6616s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6616: 10925-11924 Arabidopsis halleri
Araha.6616s0004 2.0kb upstream 2.0kb upstream 5172 true Scaffold6616: 11925-17096 Arabidopsis halleri
Araha.6616s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6616: 15097-17096 Arabidopsis halleri
Araha.6616s0004 2.0kb downstream 2.0kb downstream 5172 true Scaffold6616: 9925-15096 Arabidopsis halleri
Araha.6616s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6616: 9925-11924 Arabidopsis halleri
Araha.6616s0004 5.0kb upstream 5.0kb upstream 8172 true Scaffold6616: 11925-20096 Arabidopsis halleri
Araha.6616s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6616: 15097-20096 Arabidopsis halleri
Araha.6616s0004 5.0kb downstream 5.0kb downstream 8172 true Scaffold6616: 6925-15096 Arabidopsis halleri
Araha.6616s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6616: 6925-11924 Arabidopsis halleri
Araha.6616s0004 10.0kb upstream 10.0kb upstream 13172 true Scaffold6616: 11925-25096 Arabidopsis halleri
Araha.6616s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6616: 15097-25096 Arabidopsis halleri
Araha.6616s0004 10.0kb downstream 10.0kb downstream 13172 true Scaffold6616: 1925-15096 Arabidopsis halleri
Araha.6616s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6616: 1925-11924 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372861 5261 Brassicaceae View MSA
123830471 5264 Brassicales-Malvales View MSA
124341830 5266 SBM View MSA
124242776 5268 Malvidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain