Gene : Araha.13904s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  2
Name:  ? Araha.13904s0002 Secondary Identifier:  ? PAC:28856020

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13904s0002 0.5kb upstream 0.5kb upstream 2769 true Scaffold13904: 8652-11420 Arabidopsis halleri
Araha.13904s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold13904: 8652-9151 Arabidopsis halleri
Araha.13904s0002 0.5kb downstream 0.5kb downstream 2769 true Scaffold13904: 9152-11920 Arabidopsis halleri
Araha.13904s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold13904: 11421-11920 Arabidopsis halleri
Araha.13904s0002 1.0kb upstream 1.0kb upstream 3269 true Scaffold13904: 8152-11420 Arabidopsis halleri
Araha.13904s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold13904: 8152-9151 Arabidopsis halleri
Araha.13904s0002 1.0kb downstream 1.0kb downstream 3269 true Scaffold13904: 9152-12420 Arabidopsis halleri
Araha.13904s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold13904: 11421-12420 Arabidopsis halleri
Araha.13904s0002 2.0kb upstream 2.0kb upstream 4269 true Scaffold13904: 7152-11420 Arabidopsis halleri
Araha.13904s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold13904: 7152-9151 Arabidopsis halleri
Araha.13904s0002 2.0kb downstream 2.0kb downstream 4269 true Scaffold13904: 9152-13420 Arabidopsis halleri
Araha.13904s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold13904: 11421-13420 Arabidopsis halleri
Araha.13904s0002 5.0kb upstream 5.0kb upstream 7269 true Scaffold13904: 4152-11420 Arabidopsis halleri
Araha.13904s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold13904: 4152-9151 Arabidopsis halleri
Araha.13904s0002 5.0kb downstream 5.0kb downstream 7269 true Scaffold13904: 9152-16420 Arabidopsis halleri
Araha.13904s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold13904: 11421-16420 Arabidopsis halleri
Araha.13904s0002 10.0kb upstream 10.0kb upstream 11420 true Scaffold13904: 1-11420 Arabidopsis halleri
Araha.13904s0002 10.0kb upstream 10.0kb upstream 9151 false Scaffold13904: 1-9151 Arabidopsis halleri
Araha.13904s0002 10.0kb downstream 10.0kb downstream 12269 true Scaffold13904: 9152-21420 Arabidopsis halleri
Araha.13904s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold13904: 11421-21420 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366842 5261 Brassicaceae View MSA
123832811 5264 Brassicales-Malvales View MSA
124341338 5266 SBM View MSA
124248353 5268 Malvidae View MSA
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain