Gene : Araha.13581s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR20852:SF53 - GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1
Name:  ? Araha.13581s0001 Secondary Identifier:  ? PAC:28862310
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLNSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3282 Arabidopsis halleri pathologic  
Ahalleri PWY-381 Arabidopsis halleri pathologic  
Ahalleri PWY-6549 Arabidopsis halleri pathologic  
Ahalleri PWY-6963 Arabidopsis halleri pathologic  
Ahalleri PWY-6964 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13581s0001 0.5kb upstream 0.5kb upstream 3991 true Scaffold13581: 1103-5093 Arabidopsis halleri
Araha.13581s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold13581: 4594-5093 Arabidopsis halleri
Araha.13581s0001 0.5kb downstream 0.5kb downstream 3991 true Scaffold13581: 603-4593 Arabidopsis halleri
Araha.13581s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13581: 603-1102 Arabidopsis halleri
Araha.13581s0001 1.0kb upstream 1.0kb upstream 4491 true Scaffold13581: 1103-5593 Arabidopsis halleri
Araha.13581s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold13581: 4594-5593 Arabidopsis halleri
Araha.13581s0001 1.0kb downstream 1.0kb downstream 4491 true Scaffold13581: 103-4593 Arabidopsis halleri
Araha.13581s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold13581: 103-1102 Arabidopsis halleri
Araha.13581s0001 2.0kb upstream 2.0kb upstream 5491 true Scaffold13581: 1103-6593 Arabidopsis halleri
Araha.13581s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold13581: 4594-6593 Arabidopsis halleri
Araha.13581s0001 2.0kb downstream 2.0kb downstream 4593 true Scaffold13581: 1-4593 Arabidopsis halleri
Araha.13581s0001 2.0kb downstream 2.0kb downstream 1102 false Scaffold13581: 1-1102 Arabidopsis halleri
Araha.13581s0001 5.0kb upstream 5.0kb upstream 8491 true Scaffold13581: 1103-9593 Arabidopsis halleri
Araha.13581s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold13581: 4594-9593 Arabidopsis halleri
Araha.13581s0001 5.0kb downstream 5.0kb downstream 4593 true Scaffold13581: 1-4593 Arabidopsis halleri
Araha.13581s0001 5.0kb downstream 5.0kb downstream 1102 false Scaffold13581: 1-1102 Arabidopsis halleri
Araha.13581s0001 10.0kb upstream 10.0kb upstream 8834 true Scaffold13581: 1103-9936 Arabidopsis halleri
Araha.13581s0001 10.0kb upstream 10.0kb upstream 5343 false Scaffold13581: 4594-9936 Arabidopsis halleri
Araha.13581s0001 10.0kb downstream 10.0kb downstream 4593 true Scaffold13581: 1-4593 Arabidopsis halleri
Araha.13581s0001 10.0kb downstream 10.0kb downstream 1102 false Scaffold13581: 1-1102 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363026 5261 Brassicaceae View MSA
123834963 5264 Brassicales-Malvales View MSA
124336894 5266 SBM View MSA
124240193 5268 Malvidae View MSA
124069672 5270 Rosid View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain