Gene : Araha.13532s0011 A. halleri v1.1
Defline:  (1 of 1) PTHR11088:SF31 - TRNA DIMETHYLALLYLTRANSFERASE 9 Genomic Order:  11
Name:  ? Araha.13532s0011 Secondary Identifier:  ? PAC:28855928
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-2781 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13532s0011 0.5kb upstream 0.5kb upstream 3886 true Scaffold13532: 41590-45475 Arabidopsis halleri
Araha.13532s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold13532: 44976-45475 Arabidopsis halleri
Araha.13532s0011 0.5kb downstream 0.5kb downstream 3886 true Scaffold13532: 41090-44975 Arabidopsis halleri
Araha.13532s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold13532: 41090-41589 Arabidopsis halleri
Araha.13532s0011 1.0kb upstream 1.0kb upstream 4386 true Scaffold13532: 41590-45975 Arabidopsis halleri
Araha.13532s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold13532: 44976-45975 Arabidopsis halleri
Araha.13532s0011 1.0kb downstream 1.0kb downstream 4386 true Scaffold13532: 40590-44975 Arabidopsis halleri
Araha.13532s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold13532: 40590-41589 Arabidopsis halleri
Araha.13532s0011 2.0kb upstream 2.0kb upstream 5386 true Scaffold13532: 41590-46975 Arabidopsis halleri
Araha.13532s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold13532: 44976-46975 Arabidopsis halleri
Araha.13532s0011 2.0kb downstream 2.0kb downstream 5386 true Scaffold13532: 39590-44975 Arabidopsis halleri
Araha.13532s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold13532: 39590-41589 Arabidopsis halleri
Araha.13532s0011 5.0kb upstream 5.0kb upstream 6482 true Scaffold13532: 41590-48071 Arabidopsis halleri
Araha.13532s0011 5.0kb upstream 5.0kb upstream 3096 false Scaffold13532: 44976-48071 Arabidopsis halleri
Araha.13532s0011 5.0kb downstream 5.0kb downstream 8386 true Scaffold13532: 36590-44975 Arabidopsis halleri
Araha.13532s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold13532: 36590-41589 Arabidopsis halleri
Araha.13532s0011 10.0kb upstream 10.0kb upstream 6482 true Scaffold13532: 41590-48071 Arabidopsis halleri
Araha.13532s0011 10.0kb upstream 10.0kb upstream 3096 false Scaffold13532: 44976-48071 Arabidopsis halleri
Araha.13532s0011 10.0kb downstream 10.0kb downstream 13386 true Scaffold13532: 31590-44975 Arabidopsis halleri
Araha.13532s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold13532: 31590-41589 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377436 5261 Brassicaceae View MSA
123831177 5264 Brassicales-Malvales View MSA
124343005 5266 SBM View MSA
124240666 5268 Malvidae View MSA
124066214 5270 Rosid View MSA
123738978 5271 Pentapetalae View MSA
122792264 5272 Eudicot View MSA
122047791 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain