Gene : Araha.13532s0003 A. halleri v1.1
Defline:  (1 of 1) KOG0106//KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily Genomic Order:  3
Name:  ? Araha.13532s0003 Secondary Identifier:  ? PAC:28855923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13532s0003 0.5kb upstream 0.5kb upstream 2896 true Scaffold13532: 4645-7540 Arabidopsis halleri
Araha.13532s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold13532: 4645-5144 Arabidopsis halleri
Araha.13532s0003 0.5kb downstream 0.5kb downstream 2896 true Scaffold13532: 5145-8040 Arabidopsis halleri
Araha.13532s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold13532: 7541-8040 Arabidopsis halleri
Araha.13532s0003 1.0kb upstream 1.0kb upstream 3396 true Scaffold13532: 4145-7540 Arabidopsis halleri
Araha.13532s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold13532: 4145-5144 Arabidopsis halleri
Araha.13532s0003 1.0kb downstream 1.0kb downstream 3396 true Scaffold13532: 5145-8540 Arabidopsis halleri
Araha.13532s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold13532: 7541-8540 Arabidopsis halleri
Araha.13532s0003 2.0kb upstream 2.0kb upstream 4396 true Scaffold13532: 3145-7540 Arabidopsis halleri
Araha.13532s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold13532: 3145-5144 Arabidopsis halleri
Araha.13532s0003 2.0kb downstream 2.0kb downstream 4396 true Scaffold13532: 5145-9540 Arabidopsis halleri
Araha.13532s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold13532: 7541-9540 Arabidopsis halleri
Araha.13532s0003 5.0kb upstream 5.0kb upstream 7396 true Scaffold13532: 145-7540 Arabidopsis halleri
Araha.13532s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold13532: 145-5144 Arabidopsis halleri
Araha.13532s0003 5.0kb downstream 5.0kb downstream 7396 true Scaffold13532: 5145-12540 Arabidopsis halleri
Araha.13532s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold13532: 7541-12540 Arabidopsis halleri
Araha.13532s0003 10.0kb upstream 10.0kb upstream 7540 true Scaffold13532: 1-7540 Arabidopsis halleri
Araha.13532s0003 10.0kb upstream 10.0kb upstream 5144 false Scaffold13532: 1-5144 Arabidopsis halleri
Araha.13532s0003 10.0kb downstream 10.0kb downstream 12396 true Scaffold13532: 5145-17540 Arabidopsis halleri
Araha.13532s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold13532: 7541-17540 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041103 5273 Angiosperm View MSA
122369906 5261 Brassicaceae View MSA
123830609 5264 Brassicales-Malvales View MSA
124342058 5266 SBM View MSA
124239979 5268 Malvidae View MSA
124063155 5270 Rosid View MSA
123740739 5271 Pentapetalae View MSA
122788079 5272 Eudicot View MSA
121345808 5274 Embryophyte View MSA
123427736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain